RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PARP8Q8N3A8 854 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CAPSLQ8WWF8 208 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 APOOQ9BUR5 198 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 EFCAB11Q9BUY7 163 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 BRF2Q9HAW0 419 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CD207Q9UJ71 328 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 NDRG2Q9UN36 371 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 LDLRP01130 860 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ENDOUP21128 410 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ELK4P28324 431 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PAGE2BQ5JRK9 111 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 LRIF1Q5T3J3 769 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 GTF2IRD2BQ6EKJ0 949 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 UTS2BQ765I0 119 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 GTF2IRD2Q86UP8 949 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 HORMAD1Q86X24 394 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MFSD2AQ8NA29 543 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 OR5AK3PQ8NH89 298 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 LILRB4Q8NHJ6 448 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 HMGB4Q8WW32 186 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 FCRL1Q96LA6 429 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 C9orf16Q9BUW7 83 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ABCG4Q9H172 646 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 KCNK12Q9HB15 430 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ARHGEF17Q96PE2 2063 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ACOX3O15254 700 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 CREG1O75629 220 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 KLHL18O94889 574 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 CPNE6O95741 557 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ACADMP11310 421 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 HOXB9P17482 250 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 NDUFV2P19404 249 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 IDSP22304 550 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 CXCR2P25025 360 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 C2orf80Q0P641 193 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 LAPTM4AQ15012 233 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 RFPL4BQ6ZWI9 263 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 KLHDC8AQ8IYD2 350 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 OXR1Q8N573 874 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 GABRG3Q99928 467 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 MENTQ9BUN1 341 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 FANCEQ9HB96 536 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 AKIP1Q9NQ31 210 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 EXD2Q9NVH0 621 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 MAN2B2Q9Y2E5 1009 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 SEC14L2O76054 403 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 DIRAS1O95057 198 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ALBP02768 609 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 TMBIM6P55061 237 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 CHRNB3Q05901 458 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 MTAPQ13126 283 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 FXNQ16595 210 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 NDUFA5Q16718 116 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 SPIN4Q56A73 249 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ENPP7Q6UWV6 458 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 Q6ZS52 159 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ANKRD13BQ86YJ7 626 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 ZFP90Q8TF47 636 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 MAGEB10Q96LZ2 347 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 CCDC90BQ9GZT6 254 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 LHPPQ9H008 270 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 NTN4Q9HB63 628 aa11.17□□□□□ -0.62
SHMT2-212ENST00000554467 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 PNMA8BQ9ULN7 279 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-212ENST00000554467 A0A1W2PPV9 198 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TCRBV21S2A2A0A5A6 115 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TOR1BO14657 336 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 OR1F1O43749 312 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 LCMT2O60294 686 aaKnown RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 NOBOXO60393 691 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 MAN1A2O60476 641 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 IL3P08700 152 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 RPS9P46781 194 aaKnown RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 GZMMP51124 257 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 RAD23AP54725 363 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SRSF11Q05519 484 aaKnown RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 RPA4Q13156 261 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 FAM98BQ52LJ0 330 aaKnown RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ATAD3BQ5T9A4 648 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 LAS2Q8IYD9 372 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TBC1D21Q8IYX1 336 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 OR7G1Q8NGA0 311 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 UCN3Q969E3 161 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 REPS1Q96D71 796 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SLC47A1Q96FL8 570 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 BTBD1Q9H0C5 482 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 MUC13Q9H3R2 512 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TMEM9Q9P0T7 183 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 RAPGEFL1Q9UHV5 662 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PSME2Q9UL46 239 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 WDFY4Q6ZS81 3184 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms