RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 CAPNS1P04632 268 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 RNH1P13489 461 aaKnown RBP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 ITGAXP20702 1163 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 LSP1P33241 339 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 RAB8AP61006 207 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 PRAMEF17Q5VTA0 474 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 TIPARPQ7Z3E1 657 aaKnown RBP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 MARCH9Q86YJ5 346 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 RNF175Q8N4F7 328 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 OR2T11Q8NH01 316 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 CEP70Q8NHQ1 597 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 AGR3Q8TD06 166 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 GATA6Q92908 595 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 CHMP6Q96FZ7 201 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 ZNF764Q96H86 408 aaPredicted RBP12.87□□□□□ -0.35
PSMC6-205ENST00000553899 TRIM55Q9BYV6 548 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
PSMC6-205ENST00000553899 ARHGAP10A1A4S6 786 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 C4orf51C9J302 202 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TERTO14746 1132 aaKnown RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 VIMP08670 466 aaKnown RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 FAM58BPP0C7Q3 252 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 PRPS2P11908 318 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 DRD2P14416 443 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 IL1RNP18510 177 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 FBLP22087 321 aaKnown RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 JAK1P23458 1154 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TIA1P31483 386 aaKnown RBP eCLIP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ERVK-8P63133 956 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 HMGCS1Q01581 520 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 OCA2Q04671 838 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 NR6A1Q15406 480 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 CCNYL2Q5T2Q4 361 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 METTL21CQ5VZV1 264 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 CYP20A1Q6UW02 462 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ZNF793Q6ZN11 406 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 SPATA19Q7Z5L4 167 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 GPR180Q86V85 440 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ZNF248Q8NDW4 579 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 OR51Q1Q8NH59 317 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ZCCHC10Q8TBK6 192 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 NKD1Q969G9 470 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 COL26A1Q96A83 441 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TUBGCP3Q96CW5 907 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 C3orf30Q96M34 536 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 HBEGFQ99075 208 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 SLC22A11Q9NSA0 550 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 NDOR1Q9UHB4 597 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
PSMC6-205ENST00000553899 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 FIS1Q9Y3D6 152 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ASB4Q9Y574 426 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 ASPMQ8IZT6 3477 aa12.86□□□□□ -0.35
PSMC6-205ENST00000553899 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 SCN3AQ9NY46 2000 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 GMNCA6NCL1 334 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 SGK494L7N484 410 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 CYR61O00622 381 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 SDHDO14521 159 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 PROM1O43490 865 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 CHST10O43529 356 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 RAD1O60671 282 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 PRMT3O60678 531 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 BMP10O95393 424 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 JUNP05412 331 aaKnown RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 ANXA4P09525 319 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 LBPP18428 481 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 PPP2R1BP30154 601 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 BUD31P41223 144 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 ASMTP46597 345 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 MRPL19P49406 292 aaKnown RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 MAPK12P53778 367 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 LIM2P55344 173 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 HSD17B7P56937 341 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 RAB38P57729 211 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 C21orf58P58505 322 aa12.85□□□□□ -0.35
PSMC6-205ENST00000553899 RAE1P78406 368 aaKnown RBP12.85□□□□□ -0.35
PSMC6-205ENST00000553899 ZNF763Q0D2J5 394 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms