RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 WDR83Q9BRX9 315 aaKnown RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 SPNS1Q9H2V7 528 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 PROK2Q9HC23 129 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 HPF1Q9NWY4 346 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 FBXW2Q9UKT8 454 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 ACAD8Q9UKU7 415 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 MED12Q93074 2177 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 TRGV5A0A0B4J1U4 118 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ATP6AP2A0A1C7CYW4 349 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 GOLGA8KD6RF30 607 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 GOLGA8TH3BQL2 631 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CLDN4O14493 209 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 DVL2O14641 736 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ARHGEF9O43307 516 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ATP6AP2O75787 350 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 EPPINO95925 133 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MBD3O95983 291 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MPC1LP0DKB6 136 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 NPPBP16860 134 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 RWDD2BP57060 319 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 PPP2R2BQ00005 443 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CRYZQ08257 329 aaKnown RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CUL1Q13616 776 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF750Q32MQ0 723 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 RNF187Q5TA31 235 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 PPP1R21Q6ZMI0 780 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MBOAT1Q6ZNC8 495 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 RTL4Q6ZR62 310 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MAATS1Q7Z4T9 603 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 YTHDF3Q7Z739 585 aaKnown RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CA13Q8N1Q1 262 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 LRRC25Q8N386 305 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ARMC2Q8NEN0 867 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 PPHLN1Q8NEY8 458 aaKnown RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ASB15Q8WXK1 588 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ATG4AQ8WYN0 398 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 KIAA1191Q96A73 305 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 DACH2Q96NX9 599 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 OR4K3Q96R72 315 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 TCF12Q99081 682 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 BDH2Q9BUT1 245 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 KIFC1Q9BW19 673 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ACKR4Q9NPB9 350 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ABCF3Q9NUQ8 709 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ZNHIT6Q9NWK9 470 aaKnown RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 MTRF1LQ9UGC7 380 aaKnown RBP8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ANAPC5Q9UJX4 755 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 ERVK-11Q9UQG0 969 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CRYL1Q9Y2S2 319 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 DSCAMO60469 2012 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 CR1P17927 2039 aa8.36□□□□□ -1.07
PRKCH-208ENST00000553846 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 MBD3L4A6NDZ8 208 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 MBD3L5A6NJ08 208 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 DEFB108AA8MXU0 73 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 WWP2O00308 870 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 ZFAND5O76080 213 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SOX30O94993 753 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 VAPBO95292 243 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 GAS8O95995 478 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 F12P00748 615 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 OGNP20774 298 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 LOXP28300 417 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 FDFT1P37268 417 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 MAGEA1P43355 309 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SCTRP47872 440 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 TIAL1Q01085 375 aaKnown RBP eCLIP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 PDAP1Q13442 181 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SLC10A1Q14973 349 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 POU4F3Q15319 338 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF791Q3KP31 576 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 NIPAL1Q6NVV3 410 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
PRKCH-208ENST00000553846 C17orf64Q86WR6 236 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 KIF18BQ86Y91 864 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 LACC1Q8IV20 430 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF321PQ8N8H1 164 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 ANKRD53Q8N9V6 530 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 NEIL3Q8TAT5 605 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 KCNJ9Q92806 393 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 CAPZA3Q96KX2 299 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 MARK4Q96L34 752 aa8.35□□□□□ -1.07
PRKCH-208ENST00000553846 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms