RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 GANQ9H2C0 597 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 DDX28Q9NUL7 540 aaKnown RBP4.46□□□□□ -1.7
SCFD1-209ENST00000553280 RNF186Q9NXI6 227 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 EPHA6Q9UF33 1036 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 POMT2Q9UKY4 750 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 PPP2R2CQ9Y2T4 447 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 AP1M2Q9Y6Q5 423 aa4.46□□□□□ -1.7
SCFD1-209ENST00000553280 DISP3Q9P2K9 1392 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 NKX6-3A6NJ46 265 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SRRM4A7MD48 611 aaKnown RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 CHEK1O14757 476 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 OGTO15294 1046 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 BUB3O43684 328 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 FGF17O60258 216 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 NADKO95544 446 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 FAM157CP0CG43 387 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 PRKAR1AP10644 381 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 ACKR3P25106 362 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 CTNNA2P26232 953 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 MARCKSP29966 332 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 AKT2P31751 481 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 OR3A2P47893 321 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 TKTL1P51854 596 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF131P52739 623 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 HERV-K104P63124 156 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SPP2Q13103 211 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 CEBPEQ15744 281 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 FASTKD1Q53R41 847 aaKnown RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 NKAIN2Q5VXU1 208 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 RUSC1-AS1Q66K80 236 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SLC35E4Q6ICL7 350 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF790Q6PG37 636 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 OLFM4Q6UX06 510 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 CEACAM20Q6UY09 585 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 RFPL4BQ6ZWI9 263 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SLC43A2Q8N370 569 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 RNF148Q8N7C7 305 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 TCEANCQ8N8B7 351 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 OR13C5Q8NGS8 318 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 OR2T11Q8NH01 316 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SYAP1Q96A49 352 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 LURAP1Q96LR2 239 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 TAAR6Q96RI8 345 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 S1PR3Q99500 378 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 IL12RB2Q99665 862 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
SCFD1-209ENST00000553280 RWDD1Q9H446 243 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 FAM212BQ9NTI7 297 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCFD1-209ENST00000553280 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 SMIM1B2RUZ4 78 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 P2RY10O00398 339 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 EEF2KO00418 725 aaKnown RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 P2RX6O15547 441 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 LRP3O75074 770 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 KRT36O76013 467 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 SEC24AO95486 1093 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 TXNDC12O95881 172 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 CLPTM1O96005 669 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 IFNB1P01574 187 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 RPL35AP18077 110 aaKnown RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 FUT1P19526 365 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 AADACP22760 399 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 ACAA2P42765 397 aaKnown RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 LBX1P52954 281 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 SLC26A5P58743 744 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 PRKCEQ02156 737 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 MFGE8Q08431 387 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 CNTN1Q12860 1018 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 TEAD2Q15562 447 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 TRADDQ15628 312 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 CARTPTQ16568 116 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 LYPLAL1Q5VWZ2 237 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 IRGCQ6NXR0 463 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 CDHR3Q6ZTQ4 885 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 FAM71CQ8NEG0 241 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 OR4L1Q8NH43 312 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 SUSD6Q92537 303 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 CASP10Q92851 521 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 MRPL53Q96EL3 112 aaKnown RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 C16orf58Q96GQ5 468 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 DPH5Q9H2P9 285 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF665Q9H7R5 613 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 ECT2Q9H8V3 914 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 MAN2C1Q9NTJ4 1040 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 PLEK2Q9NYT0 353 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF319Q9P2F9 582 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 DBF4Q9UBU7 674 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-209ENST00000553280 COPS7AQ9UBW8 275 aa4.44□□□□□ -1.7
SCFD1-209ENST00000553280 A0A087WZ39 114 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 A0A0G2JLW4 131 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 FAM172BPA6NC97 362 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 F8WDY8 70 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 PEX11AO75192 247 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 AKR7A3O95154 331 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 EML2O95834 649 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 APRTP07741 180 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms