RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
HDAC7-230ENST00000552960 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
HDAC7-230ENST00000552960 MAP4K5Q9Y4K4 846 aa11.86□□□□□ -0.51
HDAC7-230ENST00000552960 A0A1B0GVM2 712 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PLK4O00444 970 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 SMAD6O43541 496 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 MRPS14O60783 128 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PRAMEF4O60810 478 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 TMCC2O75069 709 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 FGBP02675 491 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 HOXB6P17509 224 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 HNF1BP35680 557 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CRYBA2P53672 197 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 EPHB3P54753 998 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 NTHL1P78549 312 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 SRSF11Q05519 484 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 GAB1Q13480 694 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PTGES3Q15185 160 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 TIMM50Q3ZCQ8 353 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 COX20Q5RI15 118 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 ADGRF1Q5T601 910 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PRAMEF9Q5VWM5 478 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 BCDIN3DQ7Z5W3 292 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CCDC190Q86UF4 302 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 C11orf74Q86VG3 221 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 FAM9CQ8IZT9 166 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 C11orf65Q8NCR3 313 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 FAM129BQ96TA1 746 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 EPYCQ99645 322 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 MALT1Q9UDY8 824 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PCDHB11Q9Y5F2 797 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 LTBP2Q14767 1821 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 ANAPC1Q9H1A4 1944 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CCDC182A6NF36 153 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 OR6C70A6NIJ9 312 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 C8AP07357 584 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CCR7P32248 378 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CNR2P34972 360 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 WNT3P56703 355 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CCDC85BQ15834 202 aaPredicted RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 PAMR1Q6UXH9 720 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 VRK3Q8IV63 474 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 VPS37AQ8NEZ2 397 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CSGALNACT1Q8TDX6 532 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 COQ8BQ96D53 544 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 VPS29Q9UBQ0 182 aa11.85□□□□□ -0.51
HDAC7-230ENST00000552960 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
HDAC7-230ENST00000552960 H3BN98 237 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SAP18O00422 153 aaKnown RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 GAPDHSO14556 408 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 KPNA5O15131 536 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 AP2A2O94973 939 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ANXA4P09525 319 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SNRPD2P62316 118 aaKnown RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 CDH18Q13634 790 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 DOC2BQ14184 412 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 WDR45BQ5MNZ6 344 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 PDZK1Q5T2W1 519 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SYCE2Q6PIF2 218 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 KLHL17Q6TDP4 642 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 APCDD1Q8J025 514 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 C1orf52Q8N6N3 182 aaKnown RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 TP53I13Q8NBR0 393 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 NFKBIDQ8NI38 313 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 FOXJ1Q92949 421 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SNX18Q96RF0 628 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 GABARAPL3Q9BY60 117 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ASIC5Q9NY37 505 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 POFUT2Q9Y2G5 429 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 PCDHGA2Q9Y5H1 932 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 GABRR3A8MPY1 467 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ICMTO60725 284 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 CCNB2O95067 398 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 CTSAP10619 480 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 IL7P13232 177 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ANXA8P13928 327 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SOAT1P35610 550 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 RGNQ15493 299 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 IQCCQ4KMZ1 466 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 SLX4IPQ5VYV7 408 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 DIRAS2Q96HU8 199 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 PKP4Q99569 1192 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 NXF2Q9GZY0 626 aaKnown RBP11.84□□□□□ -0.51
HDAC7-230ENST00000552960 CLN6Q9NWW5 311 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 KCTD5Q9NXV2 234 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 COQ3Q9NZJ6 369 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 A3GALT2U3KPV4 340 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 MYOFQ9NZM1 2061 aa11.84□□□□□ -0.51
HDAC7-230ENST00000552960 CENPBD1B2RD01 187 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms