RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 FGD2Q7Z6J4 655 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 OR5T3Q8NGG3 340 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 UHMK1Q8TAS1 419 aaKnown RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ZCCHC10Q8TBK6 192 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ANKRD49Q8WVL7 239 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 SLC44A1Q8WWI5 657 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 TBC1D20Q96BZ9 403 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 PEX11GQ96HA9 241 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 CDCP1Q9H5V8 836 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ANKZF1Q9H8Y5 726 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 CLK4Q9HAZ1 481 aaKnown RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 MCCC2Q9HCC0 563 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 CTNNAL1Q9UBT7 734 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 RIPK2O43353 540 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 DNAJB6O75190 326 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
CKAP4-202ENST00000552828 CCDC166P0CW27 439 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 CDH1P12830 882 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ABOP16442 354 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF24P17028 368 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ALOX12P18054 663 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 JAK1P23458 1154 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 TPP2P29144 1249 aaPredicted RBP11.09□□□□□ -0.63
CKAP4-202ENST00000552828 CYB561P49447 251 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 SERPINB9P50453 376 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ST13P50502 369 aaKnown RBP11.09□□□□□ -0.63
CKAP4-202ENST00000552828 HLCSP50747 726 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 CCR8P51685 355 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 AP1S2P56377 157 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 MLF1P58340 268 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ATP6V0D1P61421 351 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 NAE1Q13564 534 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 MAPKAPK3Q16644 382 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 PHKG1Q16816 387 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 NIPAL1Q6NVV3 410 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 MBOAT1Q6ZNC8 495 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 TAOK1Q7L7X3 1001 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 CCDC91Q7Z6B0 441 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 EID3Q8N140 333 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 POGLUT1Q8NBL1 392 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF740Q8NDX6 193 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 PAFAH2Q99487 392 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 HAUS8Q9BT25 410 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 DERL2Q9GZP9 239 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ATG10Q9H0Y0 220 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 ARL15Q9NXU5 204 aa11.09□□□□□ -0.63
CKAP4-202ENST00000552828 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ZNF860A6NHJ4 632 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CDC7O00311 574 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 PRRG2O14669 202 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 NDUFS4O43181 175 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CHST10O43529 356 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 KRT38O76015 456 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 IGFBP2P18065 325 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CNTFP26441 200 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 SKP1P63208 163 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 HSF1Q00613 529 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 BMPR2Q13873 1038 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 SLC29A2Q14542 456 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 DEFB134Q4QY38 66 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 LGSNQ5TDP6 509 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 SBSNQ6UWP8 590 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 QSOX2Q6ZRP7 698 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CMC1Q7Z7K0 106 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ADAMTSL2Q86TH1 951 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 TBC1D1Q86TI0 1168 aaPredicted RBP11.08□□□□□ -0.64
CKAP4-202ENST00000552828 SPATA6LQ8N4H0 392 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 KIF2BQ8N4N8 673 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CPSF7Q8N684 471 aaKnown RBP11.08□□□□□ -0.64
CKAP4-202ENST00000552828 NFAM1Q8NET5 270 aaPredicted RBP11.08□□□□□ -0.64
CKAP4-202ENST00000552828 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 NT5CQ8TCD5 201 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ATL1Q8WXF7 558 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 UBXN10Q96LJ8 280 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 CCDC77Q9BR77 488 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 RBCK1Q9BYM8 510 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ZNF180Q9UJW8 692 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ITGB1BP2Q9UKP3 347 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 IKZF3Q9UKT9 509 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 ACOT9Q9Y305 439 aa11.08□□□□□ -0.64
CKAP4-202ENST00000552828 A0A087X1B8 175 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TCRBV16S1A1N1A0A5B0 115 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TRBC2A0A5B9 178 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 HMX2A2RU54 273 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 NPEPPSL1A6NEC2 478 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 OR1F1O43749 312 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 PRMT3O60678 531 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 GUCA1CO95843 209 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 SLC35E2BP0CK96 405 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 CD1DP15813 335 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TYK2P29597 1187 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 PTGER1P34995 402 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms