RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 RAE1P78406 368 aaKnown RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 SHC2P98077 582 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ZNF33BQ06732 778 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 SLAMF1Q13291 335 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ERV3-1Q14264 604 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 VWA2Q5GFL6 755 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 XKR7Q5GH72 579 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 FAM69BQ5VUD6 431 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 PRMT9Q6P2P2 845 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 FAM198BQ6UWH4 519 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 SHISA6Q6ZSJ9 500 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 COX15Q7KZN9 410 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 COMMD6Q7Z4G1 85 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 NUDT13Q86X67 352 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 LRRC34Q8IZ02 419 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CACNA2D3Q8IZS8 1091 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CA13Q8N1Q1 262 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 METTL4Q8N3J2 472 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ESX1Q8N693 406 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ACOT4Q8N9L9 421 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 SRFBP1Q8NEF9 429 aaKnown RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 CT55Q8WUE5 264 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CHTF18Q8WVB6 975 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 GATA6Q92908 595 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 NKD1Q969G9 470 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 TUBGCP3Q96CW5 907 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 PEX11GQ96HA9 241 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 LRFN5Q96NI6 719 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 SERINC2Q96SA4 455 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 MAPKAP1Q9BPZ7 522 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 TBCDQ9BTW9 1192 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 EBPLQ9BY08 206 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ZNF717Q9BY31 904 aaPredicted RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 WDR55Q9H6Y2 383 aaPredicted RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 LRTM1Q9HBL6 345 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 FGFR1OP2Q9NVK5 253 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 NMRK1Q9NWW6 199 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 AHSPQ9NZD4 102 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 IFT80Q9P2H3 777 aaPredicted RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 TRPC4Q9UBN4 977 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CTSFQ9UBX1 484 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CROTQ9UKG9 612 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 FBXW2Q9UKT8 454 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 CDC14AQ9UNH5 594 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 POLR3HQ9Y535 204 aaPredicted RBP7.53□□□□□ -1.2
CBX5-205ENST00000552562 USH1CQ9Y6N9 552 aa7.53□□□□□ -1.2
CBX5-205ENST00000552562 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
CBX5-205ENST00000552562 ASXL3Q9C0F0 2248 aa7.52□□□□□ -1.2
CBX5-205ENST00000552562 RP1P56715 2156 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 A0A088AWK7 358 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 A0A0A6YYD5 115 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 LOC101059948A0A1B0GTJ6 334 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 OR2W5A6NFC9 320 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 C9J4A7 227 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 FAM227AF5H4B4 570 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 SDHDO14521 159 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 ZNF195O14628 629 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 LSM1O15116 133 aaKnown RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 HDAC3O15379 428 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 TMPRSS11DO60235 418 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 PCDH7O60245 1069 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 DIAPH2O60879 1101 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 CNOT3O75175 753 aaKnown RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 JRKO75564 520 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 PRKRAO75569 313 aaKnown RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 CDC123O75794 336 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 LIPCP11150 499 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 TCN2P20062 427 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 ZNF10P21506 573 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 F8A1P23610 371 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 TPP2P29144 1249 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 TIA1P31483 386 aaKnown RBP eCLIP7.52□□□□□ -1.21
CBX5-205ENST00000552562 DLSTP36957 453 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 XCR1P46094 333 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 HK2P52789 917 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 SEC24CP53992 1094 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 LIM2P55344 173 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 RPL38P63173 70 aaKnown RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 SKP1P63208 163 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 GNGT1P63211 74 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 ACSM2AQ08AH3 577 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 SRSF6Q13247 344 aaKnown RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 MAP7Q14244 749 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 SLC9B1Q4ZJI4 515 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 RFTN2Q52LD8 501 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 CCNYL2Q5T2Q4 361 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 ACSM2BQ68CK6 577 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 CYP20A1Q6UW02 462 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 ZNF517Q6ZMY9 492 aaPredicted RBP7.52□□□□□ -1.21
CBX5-205ENST00000552562 RNF165Q6ZSG1 346 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 VASH2Q86V25 355 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 RETREG3Q86VR2 466 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 PRSS58Q8IYP2 241 aa7.52□□□□□ -1.21
CBX5-205ENST00000552562 KIRREL3Q8IZU9 778 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms