RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ZNF483Q8TF39 744 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 TSLPQ969D9 159 aa14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 THOC3Q96J01 351 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 IMMP1LQ96LU5 166 aa14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 NSUN5Q96P11 429 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 ERVK-6Q9BXR3 956 aa14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 PSD3Q9NYI0 1048 aa14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 RNF11Q9Y3C5 154 aa14.51□□□□□ -0.09
PRPF40B-211ENST00000551063 CCDC88CQ9P219 2028 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 IGKV3D-11A0A0A0MRZ8 115 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 A0A1W2PPM1 405 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 SYNDIG1LA6NDD5 238 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 B4GALT2O60909 372 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 OTCP00480 354 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 PRR35P0CG20 571 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 ARL1P40616 181 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 DDX39BQ13838 428 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 RUNX2Q13950 521 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 ZRSR2Q15696 482 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 CPSF6Q16630 551 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 DEPDC1Q5TB30 811 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 AGAP7PQ5VUJ5 663 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 JMJD6Q6NYC1 403 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 UBE3DQ7Z6J8 389 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 CYP4X1Q8N118 509 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 AGAP4Q96P64 663 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 WDR77Q9BQA1 342 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 PARD6BQ9BYG5 372 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 LYRM4Q9HD34 91 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 SEMA4BQ9NPR2 832 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 PRDM9Q9NQV7 894 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 PRDM7Q9NQW5 492 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 RAB21Q9UL25 225 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 DAPP1Q9UN19 280 aa14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 MRPS33Q9Y291 106 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-211ENST00000551063 OR2W5A6NFC9 320 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 FOXE1O00358 373 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 DLX3O60479 287 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PRMT3O60678 531 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 TGFB1P01137 390 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 HIST1H1TP22492 207 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CRHR1P34998 444 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CCT5P48643 541 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PRKAA2P54646 552 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 LIM2P55344 173 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 RPS13P62277 151 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 IFFO1Q0D2I5 559 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CUL3Q13618 768 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 EXT1Q16394 746 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 AP5B1Q2VPB7 878 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CCDC153Q494R4 210 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 SFT2D3Q587I9 215 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CRB2Q5IJ48 1285 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ZNF678Q5SXM1 525 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 FRG2Q64ET8 278 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PLAG1Q6DJT9 500 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PAPD4Q6PIY7 484 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 IGFL2Q6UWQ7 119 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ZNF793Q6ZN11 406 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 SCUBE1Q8IWY4 988 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ZNF595Q8IYB9 648 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 RBMXL3Q8N7X1 1067 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ARMC2Q8NEN0 867 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PPP4R1Q8TF05 950 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CCDC126Q96EE4 140 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 PTCHD1Q96NR3 888 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 CDK15Q96Q40 435 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 TMEM237Q96Q45 408 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 FRG2BQ96QU4 278 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 MTERF1Q99551 399 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 LPAR4Q99677 370 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ROPN1BQ9BZX4 212 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 EPN3Q9H201 632 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 OR51B5Q9H339 312 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 EPS8L2Q9H6S3 715 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 ROPN1Q9HAT0 212 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 TRPS1Q9UHF7 1281 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 LGALS13Q9UHV8 139 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 EMCNQ9ULC0 261 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 GRID1Q9ULK0 1009 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 STK38LQ9Y2H1 464 aa14.49□□□□□ -0.09
PRPF40B-211ENST00000551063 NUP210LQ5VU65 1888 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 IGHV3-20A0A0C4DH32 117 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 TCRBV16S1A1N1A0A5B0 115 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 BLACEA4D250 179 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 RTCAO00442 366 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 CLDN4O14493 209 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 COPEO14579 308 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SEC24DO94855 1032 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SUPT7LO94864 414 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SORBS2O94875 1100 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SEMA3DO95025 777 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 PROCP04070 461 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 IMPDH1P20839 514 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 ATP5A1P25705 553 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 PTX3P26022 381 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SOX11P35716 441 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 SSR2P43308 183 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 RAP1GDS1P52306 607 aa14.48□□□□□ -0.09
PRPF40B-211ENST00000551063 CDH13P55290 713 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms