RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 RPS13P62277 151 aaKnown RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ID2Q02363 134 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ACTN3Q08043 901 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 GTF2H2Q13888 395 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF169Q14929 603 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CPSF6Q16630 551 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 GRHL2Q6ISB3 625 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 H3F3CQ6NXT2 135 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 GTF2H2CQ6P1K8 395 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ADGRD1Q6QNK2 874 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 QSOX2Q6ZRP7 698 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CCDC91Q7Z6B0 441 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CRLF3Q8IUI8 442 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 SCUBE1Q8IWY4 988 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CLEC18CQ8NCF0 446 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 NFAM1Q8NET5 270 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 TTLQ8NG68 377 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 OR1N1Q8NGS0 311 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 MZB1Q8WU39 189 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 UCN3Q969E3 161 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 MTFMTQ96DP5 389 aaKnown RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 VPS50Q96JG6 964 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 FAR2Q96K12 515 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 TAAR6Q96RI8 345 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 MTERF1Q99551 399 aaKnown RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 PITHD1Q9GZP4 211 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 EPS8L2Q9H6S3 715 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 NOL11Q9H8H0 719 aaKnown RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 IPPKQ9H8X2 491 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 KCNK13Q9HB14 408 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 PRDM9Q9NQV7 894 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ANKRD10Q9NXR5 420 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 C19orf25Q9UFG5 118 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 PCTPQ9UKL6 214 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ANGPTL3Q9Y5C1 460 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 IKBKGQ9Y6K9 419 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TCRBV16S1A1N1A0A5B0 115 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PSMD12O00232 456 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PCDH17O14917 1159 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 B3GALT2O43825 422 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PRKRAO75569 313 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 CYC1P08574 325 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 SNRPAP09012 282 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 IL10P22301 178 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 JAK1P23458 1154 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TNFSF10P50591 281 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 MTTPP55157 894 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 CDH13P55290 713 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 RAB38P57729 211 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ARG2P78540 354 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF33BQ06732 778 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TRAF3Q13114 568 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 LAPTM5Q13571 262 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 NR6A1Q15406 480 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ZRSR2Q15696 482 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 EIF2S3LQ2VIR3 472 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PAGE2BQ5JRK9 111 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ACER2Q5QJU3 275 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF468Q5VIY5 522 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 KHDRBS2Q5VWX1 349 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 KLC3Q6P597 504 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TRIM40Q6P9F5 258 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TIFABQ6ZNK6 161 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 BEST3Q8N1M1 668 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 EFCAB3Q8N7B9 438 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ACOT4Q8N9L9 421 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 GRHL3Q8TE85 626 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 DOK4Q8TEW6 326 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 TM9SF4Q92544 642 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 SEC16BQ96JE7 1060 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 SERINC2Q96SA4 455 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 LPAR4Q99677 370 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 BARD1Q99728 777 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF717Q9BY31 904 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 HES7Q9BYE0 225 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 C12orf65Q9H3J6 166 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ANKZF1Q9H8Y5 726 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 MMP25Q9NPA2 562 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 SEMA4BQ9NPR2 832 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 DMRT3Q9NQL9 472 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PRTFDC1Q9NRG1 225 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 PNO1Q9NRX1 252 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 STMN3Q9NZ72 180 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF223Q9UK11 482 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 DAPP1Q9UN19 280 aa9.16□□□□□ -0.94
HDAC7-229ENST00000549883 COPG1Q9Y678 874 aaKnown RBP9.16□□□□□ -0.94
HDAC7-229ENST00000549883 FLNCQ14315 2725 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 COL12A1Q99715 3063 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 A8MT66 165 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 PLPP1O14494 284 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms