RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 GABARAPL2P60520 117 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 NPRL3Q12980 569 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CAMK2GQ13555 558 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 FXNQ16595 210 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ZNF404Q494X3 552 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TTC23LQ6PF05 361 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 NRSN1Q8IZ57 195 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 NAGSQ8N159 534 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SCAIQ8N9R8 606 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 RHOXF1Q8NHV9 184 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 VPS35Q96QK1 796 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 NKX2-4Q9H2Z4 354 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TMEM245Q9H330 911 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CAPN10Q9HC96 672 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 BRWD1Q9NSI6 2320 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CTDSP2O14595 271 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ASNA1O43681 348 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 HYAL3O43820 417 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 WBP4O75554 376 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 AP2A2O94973 939 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ETHE1O95571 254 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 AOAHP28039 575 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 METAP1P53582 386 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SPIBQ01892 262 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 MESP2Q0VG99 397 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 RAB30Q15771 203 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SPATS1Q496A3 300 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TPRG1LQ5T0D9 272 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 C9orf64Q5T6V5 341 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CCBE1Q6UXH8 406 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 RNF165Q6ZSG1 346 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 LYSMD2Q8IV50 215 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ENTHD1Q8IYW4 607 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 MRPL38Q96DV4 380 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 YIPF6Q96EC8 236 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 FEVQ99581 238 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CPPED1Q9BRF8 314 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 PRR14Q9BWN1 585 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TP63Q9H3D4 680 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 FAM83DQ9H4H8 585 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 THG1LQ9NWX6 298 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 IMPAD1Q9NX62 359 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 FZD4Q9ULV1 537 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 RNF6Q9Y252 685 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SGTAO43765 313 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 EPN2O95208 641 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ANXA4P09525 319 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 S100A5P33763 92 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 RAB15P59190 212 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 HNRNPA1L2Q32P51 320 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TTLL9Q3SXZ7 439 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 COX20Q5RI15 118 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 AGAP7PQ5VUJ5 663 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 KIAA1614Q5VZ46 1190 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SHQ1Q6PI26 577 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TRMT11Q7Z4G4 463 aaKnown RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TRAPPC5Q8IUR0 188 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 STX19Q8N4C7 294 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CCDC115Q96NT0 180 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 CERS4Q9HA82 394 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 ABCB9Q9NP78 766 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 DEC1Q9P2X7 70 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 IL20RAQ9UHF4 553 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 EDDM13A0A1B0GTR0 161 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 DYTNA2CJ06 578 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 H3BN98 237 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SLC28A1O00337 649 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SLC16A6O15403 523 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SPINT1O43278 529 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 NDUFB5O43674 189 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 NUAK1O60285 661 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 CCNKO75909 580 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 PRNPP04156 253 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 HLA-EP13747 358 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 KDELR2P33947 212 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 RYKP34925 604 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 PPP5CP53041 499 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ST8SIA6P61647 398 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SYCE2Q6PIF2 218 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 TAGAPQ8N103 731 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 AADATQ8N5Z0 425 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ZSCAN5AQ9BUG6 496 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 BTBD2Q9BX70 525 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SGK2Q9HBY8 427 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 NECTIN3Q9NQS3 549 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 DENND4AQ7Z401 1863 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 SPAG17Q6Q759 2223 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 M0QX08 132 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 FHP07954 510 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 OR56A5P0C7T3 313 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 MPC1LP0DKB6 136 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ITGB7P26010 798 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 EIF2DP41214 584 aaKnown RBP10.62□□□□□ -0.71
LINC00661-204ENST00000549354 WASP42768 502 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 RPS26P11Q5JNZ5 115 aaPredicted RBP10.62□□□□□ -0.71
LINC00661-204ENST00000549354 PLEKHS1Q5SXH7 462 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 NOXRED1Q6NXP6 359 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms