RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 PRIMA1Q86XR5 153 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 PALM2Q8IXS6 379 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 CPNE9Q8IYJ1 553 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 SPATA3Q8NHX4 192 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 CD200R1Q8TD46 325 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 UTP15Q8TED0 518 aaKnown RBP13.54□□□□□ -0.24
COPS7A-220ENST00000544725 RNASE6Q93091 150 aaKnown RBP13.54□□□□□ -0.24
COPS7A-220ENST00000544725 PDLIM2Q96JY6 352 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 GPR21Q99679 349 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 EXO5Q9H790 373 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 PDE10AQ9Y233 779 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 COMMD10Q9Y6G5 202 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 ATRQ13535 2644 aa13.54□□□□□ -0.24
COPS7A-220ENST00000544725 KIAA1324LA8MWY0 1029 aaPredicted RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 G3V3Y1 287 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 DVL2O14641 736 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 HCN1O60741 890 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 C8GP07360 202 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 AHRP35869 848 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 GPR143P51810 404 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 RAB8AP61006 207 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 SLC10A1Q14973 349 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 SEL1L2Q5TEA6 688 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 SHEQ5VZ18 495 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 ARMC3Q5W041 872 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 MBOAT1Q6ZNC8 495 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 C16orf47Q6ZP98 133 aaPredicted RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 RTL4Q6ZR62 310 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 SPNS2Q8IVW8 549 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 RASL10BQ96S79 203 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 FBXO6Q9NRD1 293 aaPredicted RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 MYOTQ9UBF9 498 aa13.53□□□□□ -0.24
COPS7A-220ENST00000544725 FOXD3Q9UJU5 478 aaPredicted RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
COPS7A-220ENST00000544725 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 PRKNO60260 465 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 GOSR1O95249 250 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 EPXP11678 715 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 BMP5P22003 454 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 TACR1P25103 407 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SOX3P41225 446 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 HNF4AP41235 474 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SCTRP47872 440 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 RGS4P49798 205 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 DCAF7P61962 342 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 CDK16Q00536 496 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SP140Q13342 867 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 PCBP2Q15366 365 aaKnown RBP eCLIP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 HYAL4Q2M3T9 481 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 ZNF750Q32MQ0 723 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 BBS9Q3SYG4 887 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 XKR6Q5GH73 641 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 FAM47EQ6ZV65 393 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 CA13Q8N1Q1 262 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 LRRN4CLQ8ND94 238 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SNF8Q96H20 258 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 HES6Q96HZ4 224 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 CNPPD1Q9BV87 410 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 SACM1LQ9NTJ5 587 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 MTRF1LQ9UGC7 380 aaKnown RBP13.52□□□□□ -0.25
COPS7A-220ENST00000544725 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.25
COPS7A-220ENST00000544725 FBN1P35555 2871 aaKnown RBP13.51□□□□□ -0.25
COPS7A-220ENST00000544725 TRGV5A0A0B4J1U4 118 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 SYNDIG1LA6NDD5 238 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 PABPN1LA6NDY0 278 aaKnown RBP13.51□□□□□ -0.25
COPS7A-220ENST00000544725 TUBAL3A6NHL2 446 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 WWP2O00308 870 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 CELA3AP09093 270 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 HIST1H2AGP0C0S8 130 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-220ENST00000544725 SMIM10L1P0DMW3 83 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 TPSB2P20231 275 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 HIST1H2ADP20671 130 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 HSD17B7P56937 341 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 CTBP1Q13363 440 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 BMPR2Q13873 1038 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
COPS7A-220ENST00000544725 TPSAB1Q15661 275 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 PHKG1Q16816 387 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 DUPD1Q68J44 220 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 UGT3A1Q6NUS8 523 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 CASC4Q6P4E1 433 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 HSDL2Q6YN16 418 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 KRTAP1-3Q8IUG1 177 aa13.51□□□□□ -0.25
COPS7A-220ENST00000544725 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms