RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TOP3AQ13472 1001 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 PKP1Q13835 747 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 PTK6Q13882 451 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 SNTB1Q13884 538 aaKnown RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 PIGHQ14442 188 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 CMPK2Q5EBM0 449 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 WLSQ5T9L3 541 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 GARNL3Q5VVW2 1013 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 KAZNQ674X7 775 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 NCBP2-AS2Q69YL0 99 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 FCRLBQ6BAA4 426 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 ZNF585AQ6P3V2 769 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 TRMT10BQ6PF06 316 aaKnown RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 FIGLAQ6QHK4 219 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 HIPK1Q86Z02 1210 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 MAP7D3Q8IWC1 876 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 RAB42Q8N4Z0 105 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 LILRA3Q8N6C8 439 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 ZFP62Q8NB50 900 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 OR5AR1Q8NGP9 310 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 MCOLN3Q8TDD5 553 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 TADA1Q96BN2 335 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 MMABQ96EY8 250 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 DACH2Q96NX9 599 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 SMC6Q96SB8 1091 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 COPS8Q99627 209 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 LPAR4Q99677 370 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 CCL19Q99731 98 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 AGPAT1Q99943 283 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 ZNF670Q9BS34 389 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 RAB11FIP5Q9BXF6 653 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 GANQ9H2C0 597 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 PNPLA3Q9NST1 481 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 SAE1Q9UBE0 346 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 MAGEL2Q9UJ55 1249 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 EIF3LQ9Y262 564 aaKnown RBP3.81□□□□□ -1.8
SNHG1-220ENST00000544550 KLK4Q9Y5K2 254 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 NUP210LQ5VU65 1888 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 TACC2O95359 2948 aa3.81□□□□□ -1.8
SNHG1-220ENST00000544550 LOC285095A0A1B0GVY8 99 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 SH3D21A4FU49 640 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 C2orf81A6NN90 581 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 AGAP14A8MT82 685 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 KCNK1O00180 336 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 GAPDHSO14556 408 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 CASKO14936 926 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 SGTAO43765 313 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PEX1O43933 1283 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 TMCC2O75069 709 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PDE9AO76083 593 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 AP2A2O94973 939 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 FTH1P02794 183 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 HRGP04196 525 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 EIF2S1P05198 315 aaKnown RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 FAM157CP0CG43 387 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MYBL1P10243 752 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PI3P19957 117 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 CD9P21926 228 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 BMP5P22003 454 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PDHA2P29803 388 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PEBP1P30086 187 aaKnown RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 GRIA3P42263 894 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ETV4P43268 484 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 AVPR1BP47901 424 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 HLCSP50747 726 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ITGA8P53708 1063 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 NRG3P56975 720 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ACTN3Q08043 901 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MALLQ13021 153 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ZBTB17Q13105 803 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MESDQ14696 234 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PDK2Q15119 407 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 NDUFA9Q16795 377 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 HADHQ16836 314 aaKnown RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 HYAL4Q2M3T9 481 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 GFOD2Q3B7J2 385 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 GPR33Q49SQ1 333 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MINDY4Q4G0A6 757 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ZNF658BQ4V348 819 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 SYTL3Q4VX76 610 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 DNAJC21Q5F1R6 531 aaKnown RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 C1orf185Q5T7R7 199 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 NDUFAF5Q5TEU4 345 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MFSD4BQ5TF39 518 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 BHLHB9Q6PI77 547 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 RNF44Q7L0R7 432 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MAATS1Q7Z4T9 603 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 ANKRD37Q7Z713 158 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 RPS19BP1Q86WX3 136 aaKnown RBP3.8□□□□□ -1.8
SNHG1-220ENST00000544550 LIX1LQ8IVB5 337 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 GLB1L2Q8IW92 636 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 MIER2Q8N344 545 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 PRR18Q8N4B5 295 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 AMER3Q8N944 861 aa3.8□□□□□ -1.8
SNHG1-220ENST00000544550 NUDT10Q8NFP7 164 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms