RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 COX7A2P14406 83 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 TMEM81Q6P7N7 255 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 UMODL1-AS1Q8N2C9 162 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 CLDN19Q8N6F1 224 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 AQP11Q8NBQ7 271 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMG8-202ENST00000543872 TCF25Q9BQ70 676 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 B3GAT2Q9NPZ5 323 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 ABCC13Q9NSE7 274 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 NCKAP1Q9Y2A7 1128 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 PCDHGC4Q9Y5F7 938 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 A0A1W2PQH9 124 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 A0A1W2PRG6 482 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 HYKKA2RU49 373 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 OR1E1P30953 314 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 AVPR1BP47901 424 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 TTPAP49638 278 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 EPHA5P54756 1037 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 CTBP2P56545 445 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 RPL6Q02878 288 aaKnown RBP12.16□□□□□ -0.46
SMG8-202ENST00000543872 ERICH5Q6P6B1 374 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
SMG8-202ENST00000543872 SYT12Q8IV01 421 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 SAMD14Q8IZD0 417 aaPredicted RBP12.16□□□□□ -0.46
SMG8-202ENST00000543872 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 IGSF8Q969P0 613 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 SEC22CQ9BRL7 303 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 PAAF1Q9BRP4 392 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 DOHHQ9BU89 302 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 CIPCQ9C0C6 399 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 GHITMQ9H3K2 345 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 CYB5R1Q9UHQ9 305 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 FNDC1Q4ZHG4 1894 aaPredicted RBP12.16□□□□□ -0.46
SMG8-202ENST00000543872 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
SMG8-202ENST00000543872 A0A0B4J203 849 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 TRIM3O75382 744 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 PPM1BO75688 479 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 NCR1O76036 304 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 HLA-EP13747 358 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ZNF140P52738 457 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 CLDN20P56880 219 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 EXOSC2Q13868 293 aaKnown RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 C1DQ13901 141 aaKnown RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMG8-202ENST00000543872 GRK1Q15835 563 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 MICAQ29983 383 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 FIP1L1Q6UN15 594 aaKnown RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 TAGAPQ8N103 731 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ZFP41Q8N8Y5 198 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 OR11H4Q8NGC9 324 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 KLHL6Q8WZ60 621 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 RLFQ13129 1914 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ZNF98A6NK75 572 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 PTGESO14684 152 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 CASKO14936 926 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 PROM1O43490 865 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 TOXO94900 526 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 TBX18O95935 607 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 HRGP04196 525 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 KCNE1P15382 129 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 LHCGRP22888 699 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 PBX3P40426 434 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 CRATP43155 626 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 CRYBA2P53672 197 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 FAM209BQ5JX69 171 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 DLK2Q6UY11 383 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ADGRD2Q7Z7M1 963 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 DNAJB8Q8NHS0 232 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 DNAJB3Q8WWF6 145 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 NELL2Q99435 816 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 MS4A7Q9GZW8 240 aaPredicted RBP12.15□□□□□ -0.46
SMG8-202ENST00000543872 PPA2Q9H2U2 334 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
SMG8-202ENST00000543872 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 A0A1B0GVC2 190 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 A6NIN4 97 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 H3BN98 237 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 CA12O43570 354 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 PROS1P07225 676 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 CCL23P55773 120 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 KLHL22Q53GT1 634 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 TRIM46Q7Z4K8 759 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 CFAP52Q8N1V2 620 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 C3orf58Q8NDZ4 430 aa12.14□□□□□ -0.47
SMG8-202ENST00000543872 ST8SIA4Q92187 359 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms