RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ZNF840PA6NDX5 716 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 CCRL2O00421 344 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 KPNA5O15131 536 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 EFEMP2O95967 443 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 ZDHHC11BP0C7U3 371 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PTPN2P17706 415 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 GABRB1P18505 474 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PRPS1L1P21108 318 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 STK19P49842 368 aaPredicted RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 NTHL1P78549 312 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 BCL2L1Q07817 233 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 TAF12Q16514 161 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 CCDC58Q4VC31 144 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 DGKKQ5KSL6 1271 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 TUBA3EQ6PEY2 450 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PAMR1Q6UXH9 720 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 C11orf74Q86VG3 221 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 ATCAYQ86WG3 371 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 MRPL43Q8N983 215 aaKnown RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 ASCC1Q8N9N2 400 aaKnown RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 OR4A15Q8NGL6 344 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 UBASH3BQ8TF42 649 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 FAM129BQ96TA1 746 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 SLC29A3Q9BZD2 475 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 LINC00597Q9H2U6 94 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 MOV10Q9HCE1 1003 aaKnown RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 PRAMEF33A0A0G2JMD5 474 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 A0A1W2PQ09 198 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 H7C4K7 107 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PRAMEF10O60809 474 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 GASTP01350 101 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 HIST1H2AGP0C0S8 130 aaPredicted RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 HIST1H2ADP20671 130 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 SOX6P35712 828 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 ACSM2AQ08AH3 577 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 C5orf22Q49AR2 442 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 ADGRF1Q5T601 910 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 ACSM2BQ68CK6 577 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 MMP21Q8N119 569 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 ASB15Q8WXK1 588 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 FCGR1BQ92637 280 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 HIST1H2AHQ96KK5 128 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 PKP4Q99569 1192 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 EPYCQ99645 322 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 HIST1H2AJQ99878 128 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 H2AFJQ9BTM1 129 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 SMURF1Q9HCE7 757 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 AP3M1Q9Y2T2 418 aa13.61□□□□□ -0.23
PRAME-214ENST00000543184 HELZP42694 1942 aaKnown RBP13.61□□□□□ -0.23
PRAME-214ENST00000543184 CENPXA8MT69 81 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 C8AP07357 584 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 SRCP12931 536 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CAV3P56539 151 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 MTAPQ13126 283 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 ZNF79Q15937 498 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 TPGS1Q6ZTW0 290 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 SLC34A3Q8N130 599 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CADM2Q8N3J6 435 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 UBTD2Q8WUN7 234 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 TBC1D20Q96BZ9 403 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 ASIC4Q96FT7 647 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 PHOX2BQ99453 314 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 MALT1Q9UDY8 824 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 YARS2Q9Y2Z4 477 aaKnown RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 YIPF1Q9Y548 306 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 HCFC2Q9Y5Z7 792 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 EFCAB10A6NFE3 127 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 LINC01565O15544 149 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 ENTPD6O75354 484 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.235e-17■■□□□ 14.2
PRAME-214ENST00000543184 CTSOP43234 321 aaPredicted RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 PFN3P60673 137 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 RPS26P62854 115 aaKnown RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 SELENOWP63302 87 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 HBA1P69905 142 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 GPR50Q13585 617 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CDH18Q13634 790 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CPTPQ5TA50 214 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 ZNF544Q6NX49 715 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 MEX3DQ86XN8 651 aaKnown RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 VPS35Q96QK1 796 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
PRAME-214ENST00000543184 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 FKBP14Q9NWM8 211 aa13.6□□□□□ -0.23
PRAME-214ENST00000543184 CCDC59Q9P031 241 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms