RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 RCN2Q14257 317 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 SLBPQ14493 270 aaKnown RBP eCLIP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 STEAP4Q687X5 459 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 CEP128Q6ZU80 1094 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 MDGA2Q7Z553 956 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 SCUBE1Q8IWY4 988 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 KLHDC8AQ8IYD2 350 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ZFP62Q8NB50 900 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ASB5Q8WWX0 329 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 NCLNQ969V3 563 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 TP63Q9H3D4 680 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 MCCC2Q9HCC0 563 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ADAP2Q9NPF8 381 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 HPF1Q9NWY4 346 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ANKRD17O75179 2603 aaKnown RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 A0A0G2JN53 185 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 ANKDD1BA6NHY2 528 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 C4orf51C9J302 202 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 PDE9AO76083 593 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 IFNA16P05015 189 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 SLC12A2P55011 1212 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 RAB38P57729 211 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 BMPR2Q13873 1038 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 RUNX2Q13950 521 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 FRG1Q14331 258 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 TSNQ15631 228 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 CMPK2Q5EBM0 449 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 TRIM40Q6P9F5 258 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 SLCO4C1Q6ZQN7 724 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 ZC3HC1Q86WB0 502 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 GPALPP1Q8IXQ4 340 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 ZNF595Q8IYB9 648 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 TMEM132CQ8N3T6 1108 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 ASB15Q8WXK1 588 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 RND1Q92730 232 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 MS4A6EQ96DS6 147 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 PWWP2AQ96N64 755 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 PITHD1Q9GZP4 211 aaPredicted RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 COPS7BQ9H9Q2 264 aaPredicted RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 NSMCE4AQ9NXX6 385 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 KCMF1Q9P0J7 381 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 PPIEQ9UNP9 301 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 TEX264Q9Y6I9 313 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 CLCA3PQ9Y6N3 262 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 TACC2O95359 2948 aa16.22■□□□□ 0.19
PPP1CA-210ENST00000542876 DCHS2Q6V1P9 2916 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 LRIT2A6NDA9 550 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ACOT7O00154 380 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 TCP1P17987 556 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 IVDP26440 423 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 HNRNPH1P31943 449 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 GDF5P43026 501 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 PLA2G16P53816 162 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 TAS2R39P59534 338 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 PLGLB1Q02325 96 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 TGM3Q08188 693 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ILF2Q12905 390 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ZNF460Q14592 562 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ELAVL1Q15717 326 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 CDH24Q86UP0 819 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 TCAIMQ8N3R3 496 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 FAM47BQ8NA70 645 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 PSD4Q8NDX1 1056 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 OR2L5Q8NG80 312 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 SERINC2Q96SA4 455 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 REXO4Q9GZR2 422 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 AICDAQ9GZX7 198 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 CNOT10Q9H9A5 744 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 GPRC5BQ9NZH0 403 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 PSAT1Q9Y617 370 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 ADGRG4Q8IZF6 3080 aa16.21■□□□□ 0.19
PPP1CA-210ENST00000542876 NCF1BA6NI72 391 aaPredicted RBP16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 NCF1CA8MVU1 366 aaPredicted RBP16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 FOXO6A8MYZ6 492 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 CLGNO14967 610 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 CLEC3AO75596 197 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 OR2J2O76002 312 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 NCF1P14598 390 aaPredicted RBP16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 PPP2R1BP30154 601 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 CHRNB4P30926 498 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 SLC6A12P48065 614 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 KRTAP10-9P60411 292 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 DR1Q01658 176 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 EFTUD2Q15029 972 aaKnown RBP eCLIP16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 IL20RBQ6UXL0 311 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 HSDL2Q6YN16 418 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 KLHL7Q8IXQ5 586 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 OR52N2Q8NGI0 321 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 DAZLQ92904 295 aaKnown RBP16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 RHBDF1Q96CC6 855 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 DEFB127Q9H1M4 99 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 NT5DC2Q9H857 520 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 POPDC3Q9HBV1 291 aa16.2■□□□□ 0.18
PPP1CA-210ENST00000542876 WWOXQ9NZC7 414 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms