RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 REXO4Q9GZR2 422 aaKnown RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 RHBGQ9H310 441 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 KLHL1Q9NR64 748 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ANKRD10Q9NXR5 420 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 PTBP2Q9UKA9 531 aaKnown RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 CLDN4O14493 209 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 HNRNPRO43390 633 aaKnown RBP14.61□□□□□ -0.07
VPS33A-206ENST00000542310 PIAS1O75925 651 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 TBX6O95947 436 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-206ENST00000542310 S100BP04271 92 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-206ENST00000542310 HSPA7P48741 367 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 CYB561P49447 251 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 CLCN2P51788 898 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 GPX6P59796 221 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 GTF3C1Q12789 2109 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 OR4D1Q15615 310 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF572Q7Z3I7 529 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-206ENST00000542310 VN1R5Q7Z5H4 357 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 CCDC91Q7Z6B0 441 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 SIAH3Q8IW03 269 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 POGLUT1Q8NBL1 392 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 UBTD2Q8WUN7 234 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 VMP1Q96GC9 406 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 DEFB126Q9BYW3 111 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 UNKQ9C0B0 810 aaKnown RBP14.61□□□□□ -0.07
VPS33A-206ENST00000542310 ROGDIQ9GZN7 287 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 ADAP2Q9NPF8 381 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 PRTFDC1Q9NRG1 225 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 NUDT4Q9NZJ9 180 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 CD274Q9NZQ7 290 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 RNF112Q9ULX5 631 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF835Q9Y2P0 537 aa14.61□□□□□ -0.07
VPS33A-206ENST00000542310 CCDC189A1A4V9 331 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 PRSS44E7EML9 344 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 FAM227AF5H4B4 570 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 CCL21O00585 134 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 AGAP20933 346 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 SERPINB1P30740 379 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 CASP2P42575 452 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 KCNC1P48547 511 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 HLCSP50747 726 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 MTTPP55157 894 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 MRPS25P82663 173 aaKnown RBP14.6□□□□□ -0.07
VPS33A-206ENST00000542310 RUNX2Q13950 521 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 XKR6Q5GH73 641 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 ABHD17CQ6PCB6 329 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 BNC2Q6ZN30 1099 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-206ENST00000542310 LURAP1LQ8IV03 231 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 CTAGE3PQ8IX95 158 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 SNX31Q8N9S9 440 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 SRFBP1Q8NEF9 429 aaKnown RBP14.6□□□□□ -0.07
VPS33A-206ENST00000542310 STAG3L4Q8TBR4 150 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 UBE2E3Q969T4 207 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 TMEM125Q96AQ2 219 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 KCNC2Q96PR1 638 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 COPS7BQ9H9Q2 264 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-206ENST00000542310 DAPP1Q9UN19 280 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 KLF13Q9Y2Y9 288 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-206ENST00000542310 CLDN16Q9Y5I7 305 aa14.6□□□□□ -0.07
VPS33A-206ENST00000542310 TRBV11-1A0A0K0K1C0 115 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 PRAMEF4O60810 478 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 KERAO60938 352 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 MYO1DO94832 1006 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 SLC35E2BP0CK96 405 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF24P17028 368 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 CD22P20273 847 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 CRABP2P29373 138 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 CASQ1P31415 396 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 PLTPP55058 493 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 PCDH1Q08174 1060 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 DOC2AQ14183 400 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 SLMAPQ14BN4 828 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 EFTUD2Q15029 972 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS33A-206ENST00000542310 ELAVL1Q15717 326 aaKnown RBP14.59□□□□□ -0.07
VPS33A-206ENST00000542310 HIST2H2ACQ16777 129 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-206ENST00000542310 KBTBD12Q3ZCT8 623 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF468Q5VIY5 522 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-206ENST00000542310 PRAMEF9Q5VWM5 478 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 HIST2H2AA3Q6FI13 130 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 TBC1D1Q86TI0 1168 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF227Q86WZ6 799 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 GPALPP1Q8IXQ4 340 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 GHDCQ8N2G8 530 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 SPATA6LQ8N4H0 392 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 C7orf57Q8NEG2 295 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 FBXO25Q8TCJ0 367 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 CD244Q9BZW8 370 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 NMRAL1Q9HBL8 299 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 LYRM4Q9HD34 91 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 CACNA1CQ13936 2221 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 PCNX1Q96RV3 2341 aa14.59□□□□□ -0.07
VPS33A-206ENST00000542310 MYO9AB2RTY4 2548 aa14.58□□□□□ -0.07
VPS33A-206ENST00000542310 A0A0G2JN53 185 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 CYR61O00622 381 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 CCNT2O60583 730 aaKnown RBP14.58□□□□□ -0.08
VPS33A-206ENST00000542310 SCELO95171 688 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 EPORP19235 508 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 CERS1P27544 350 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 MAGEA4P43358 317 aa14.58□□□□□ -0.08
VPS33A-206ENST00000542310 GPR143P51810 404 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms