RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ARL4DP49703 201 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 FOXM1Q08050 763 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 CEACAM7Q14002 265 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 MAPKAPK3Q16644 382 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 UBE3DQ7Z6J8 389 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 MARCH9Q86YJ5 346 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 OR7A2PQ8NGA2 310 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 C16orf78Q8WTQ4 265 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 ADAMTS14Q8WXS8 1223 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 CCDC124Q96CT7 223 aaKnown RBP26.41■■□□□ 1.82
CCM2-218ENST00000541586 DEPDC7Q96QD5 511 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 LHX9Q9NQ69 397 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 SOHLH2Q9NX45 425 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 PDP2Q9P2J9 529 aa26.41■■□□□ 1.82
CCM2-218ENST00000541586 SCAMP2O15127 329 aaKnown RBP26.4■■□□□ 1.82
CCM2-218ENST00000541586 CTSVO60911 334 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 CSO75390 466 aaKnown RBP26.4■■□□□ 1.82
CCM2-218ENST00000541586 NPPAP01160 153 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 COX7A2P14406 83 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 KPNB1Q14974 876 aaKnown RBP26.4■■□□□ 1.82
CCM2-218ENST00000541586 ISXQ2M1V0 245 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 DPY19L1Q2PZI1 675 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 ADPRMQ3LIE5 342 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 TMEM35AQ53FP2 167 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 PRMT9Q6P2P2 845 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 PAGE2Q7Z2X7 111 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 NET1Q7Z628 596 aaPredicted RBP26.4■■□□□ 1.82
CCM2-218ENST00000541586 DHDDSQ86SQ9 333 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 STARD8Q92502 1023 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 GTF2H4Q92759 462 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 TRAPPC9Q96Q05 1148 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 KLHL31Q9H511 634 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 TMEM181Q9P2C4 612 aa26.4■■□□□ 1.82
CCM2-218ENST00000541586 MDC1Q14676 2089 aaKnown RBP26.4■■□□□ 1.82
CCM2-218ENST00000541586 SLC7A2P52569 658 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 PLIN5Q00G26 463 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 SRSF11Q05519 484 aaKnown RBP26.39■■□□□ 1.82
CCM2-218ENST00000541586 WASHC2DQ5SRD0 308 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 CCNYL2Q5T2Q4 361 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 DLEU7Q6UYE1 221 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 ARHGAP22Q7Z5H3 698 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 VN1R4Q7Z5H5 301 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 RNF148Q8N7C7 305 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 MYNNQ9NPC7 610 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 PILRAQ9UKJ1 303 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 MAPRE3Q9UPY8 281 aa26.39■■□□□ 1.82
CCM2-218ENST00000541586 ZBTB11O95625 1053 aaPredicted RBP26.39■■□□□ 1.81
CCM2-218ENST00000541586 SLC6A2P23975 617 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 KIR3DL1P43629 444 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 PLA2G16P53816 162 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 GPR180Q86V85 440 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 MS4A6EQ96DS6 147 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 OR2A5Q96R48 311 aa26.39■■□□□ 1.81
CCM2-218ENST00000541586 EXO1Q9UQ84 846 aaKnown RBP26.39■■□□□ 1.81
CCM2-218ENST00000541586 CSTF2P33240 577 aaKnown RBP eCLIP26.38■■□□□ 1.813e-8■■■■■ 39.8
CCM2-218ENST00000541586 HPCAL1P37235 193 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 TAS2R50P59544 299 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 TARDBPQ13148 414 aaKnown RBP eCLIP26.38■■□□□ 1.81
CCM2-218ENST00000541586 PWP1Q13610 501 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 KCNAB1Q14722 419 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 C1orf146Q5VVC0 180 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 OR4F3Q6IEY1 312 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 ANKRD26P1Q6NSI1 321 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 PRSS42Q7Z5A4 293 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 TMPRSS12Q86WS5 348 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 NUDT13Q86X67 352 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 TMEM132CQ8N3T6 1108 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 DNAJB14Q8TBM8 379 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 QRFPRQ96P65 431 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 C17orf62Q9BQA9 187 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 KNTC1P50748 2209 aa26.38■■□□□ 1.81
CCM2-218ENST00000541586 WDFY3Q8IZQ1 3526 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 A0A0J9YVX5 310 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 GABRR3A8MPY1 467 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 MAP3K7O43318 606 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 ENTPD5O75356 428 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 RELAQ04206 551 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 TRA2AQ13595 282 aaKnown RBP eCLIP26.37■■□□□ 1.81
CCM2-218ENST00000541586 TOR1AIP1Q5JTV8 583 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 C6orf10Q5SRN2 563 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 C6orf163Q5TEZ5 329 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 OR4C11Q6IEV9 310 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 FAM71E1Q6IPT2 247 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 ASPGQ86U10 573 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 OR8J2Q8NGG1 315 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 STRADBQ9C0K7 418 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 ZNF768Q9H5H4 540 aaKnown RBP26.37■■□□□ 1.81
CCM2-218ENST00000541586 ABCD2Q9UBJ2 740 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 ADAM29Q9UKF5 820 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 POMPQ9Y244 141 aa26.37■■□□□ 1.81
CCM2-218ENST00000541586 A0A0G2JN53 185 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 ARHGAP10A1A4S6 786 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 C4orf51C9J302 202 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 TOX3O15405 576 aaPredicted RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 KCNH1O95259 989 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 B3GALT4O96024 378 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 PIM1P11309 404 aaPredicted RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 ME2P23368 584 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 CCKBRP32239 447 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 MAPK12P53778 367 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms