RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PMS2CLQ68D20 193 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 PAQR3Q6TCH7 311 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 TMEM179BQ7Z7N9 219 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 TMEM150AQ86TG1 271 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SERPINA11Q86U17 422 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 PIM3Q86V86 326 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 RNF130Q86XS8 419 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 KRT73Q86Y46 540 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 ZDHHC21Q8IVQ6 265 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 CCDC103Q8IW40 242 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF683Q8IZ20 524 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 STK40Q8N2I9 435 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 TMEM132CQ8N3T6 1108 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 OR10T2Q8NGX3 314 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 OR10A6Q8NH74 314 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 FBXO30Q8TB52 745 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 METTL6Q8TCB7 284 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 MRPS31Q92665 395 aaKnown RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 KCNJ9Q92806 393 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 CHFRQ96EP1 664 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 PCED1BQ96HM7 432 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 ITCHQ96J02 903 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SERPINB11Q96P15 392 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 WDFY2Q96P53 400 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 EPYCQ99645 322 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SEPT5Q99719 369 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SLC29A3Q9BZD2 475 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 DPY30Q9C005 99 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 CLMPQ9H6B4 373 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 NOL6Q9H6R4 1146 aaKnown RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SEMA4BQ9NPR2 832 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 TMEM9BQ9NQ34 198 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 OLA1Q9NTK5 396 aaKnown RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 EHD3Q9NZN3 535 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 VAPAQ9P0L0 249 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SPASTQ9UBP0 616 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 ENOPH1Q9UHY7 261 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 USP22Q9UPT9 525 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 CFL2Q9Y281 166 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 INVSQ9Y283 1065 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 BTBD3Q9Y2F9 522 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 MED16Q9Y2X0 877 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 PCDHGB3Q9Y5G1 929 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 SNX10Q9Y5X0 201 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 PTGDR2Q9Y5Y4 395 aa7.36□□□□□ -1.23
CCDC60-204ENST00000539847 KIF26AQ9ULI4 1882 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-204ENST00000539847 LAMA1P25391 3075 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PDCD11Q14690 1871 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SH3D21A4FU49 640 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 OTOL1A6NHN0 477 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 LRRC14BA6NHZ5 514 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 C4orf47A7E2U8 309 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CLCA1A8K7I4 914 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 H7C0S8 307 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 M0R082 166 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 GFRA2O00451 464 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 DSCR3O14972 297 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TBX1O43435 398 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SLITRK5O94991 958 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 OR4F21O95013 312 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TSPAN12O95859 305 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 EGFP01133 1207 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ESR1P03372 595 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PGRP06401 933 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 YES1P07947 543 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 GSTP1P09211 210 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 HOXB9P17482 250 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PRPH2P23942 346 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 HLA-DMAP28067 261 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PKLRP30613 574 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RRM2P31350 389 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 GJA4P35212 333 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RCVRNP35243 200 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 HNF4AP41235 474 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CASP2P42575 452 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SLC15A1P46059 708 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PIK3CGP48736 1102 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 MAPKAPK2P49137 400 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TTPAP49638 278 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 DGKEP52429 567 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CLDN8P56748 225 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RPP38P78345 283 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CYP4F8P98187 520 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TSPY1Q01534 308 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NPRL3Q12980 569 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SLC13A2Q13183 592 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 VEZF1Q14119 521 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 DMC1Q14565 340 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TAF1AQ15573 450 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TSNQ15631 228 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RBBP7Q16576 425 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TIGD6Q17RP2 521 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ZFP69Q49AA0 526 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 YIF1BQ5BJH7 314 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 C6orf183Q5T699 404 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RNLSQ5VYX0 342 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms