RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 C14orf105Q9NVL8 296 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 NXT1Q9UKK6 140 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 APC2O95996 2303 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 A0A088AWK7 358 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 FAM227AF5H4B4 570 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 AZIN1O14977 448 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 ITM2AO43736 263 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 B3GALT2O43825 422 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 ULK1O75385 1050 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 LYPLA1O75608 230 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 RECKO95980 971 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 SERPINE1P05121 402 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 UROSP10746 265 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 ZNF10P21506 573 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 HIST1H1TP22492 207 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 BSGP35613 385 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 SERPINB5P36952 375 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 SSR2P43308 183 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 EFNA3P52797 238 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 GALNT1Q10472 559 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 CSTF3Q12996 717 aaKnown RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 SSPNQ14714 243 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 AP5B1Q2VPB7 878 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 ACOT4Q8N9L9 421 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 SNRNP27Q8WVK2 155 aaKnown RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 CENPKQ9BS16 269 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 CRB3Q9BUF7 120 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 NPLQ9BXD5 320 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 ZNF717Q9BY31 904 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 ROGDIQ9GZN7 287 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 BRF2Q9HAW0 419 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 CLK4Q9HAZ1 481 aaKnown RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
TSPAN9-207ENST00000539631 C3orf18Q9UK00 162 aa12□□□□□ -0.49
TSPAN9-207ENST00000539631 AHCTF1Q8WYP5 2266 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 MAP1BP46821 2468 aaKnown RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 USP24Q9UPU5 2620 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 SERTM1A2A2V5 107 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 IDSB3KWA1 339 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 TMEM114B3SHH9 223 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 TMEM233B4DJY2 109 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 EEDO75530 441 aaKnown RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 CDC123O75794 336 aaPredicted RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 SEMA3DO95025 777 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 SCELO95171 688 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 HEXBP07686 556 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 FHP07954 510 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 FGF4P08620 206 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 RNH1P13489 461 aaKnown RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 HSD3B1P14060 373 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 HSD3B2P26439 372 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 ARFIP1P53367 373 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 EMP2P54851 167 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 LIM2P55344 173 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 RAB38P57729 211 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 ABCE1P61221 599 aaKnown RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 HMGCS1Q01581 520 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 SLAMF1Q13291 335 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 SH2D4BQ5SQS7 431 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 KANK2Q63ZY3 851 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 FAAH2Q6GMR7 532 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 PPP1R32Q7Z5V6 425 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 RAB43Q86YS6 212 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 METTL4Q8N3J2 472 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 AGR3Q8TD06 166 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 TBC1D20Q96BZ9 403 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 OR1F2PQ96R84 312 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 MAPKAP1Q9BPZ7 522 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 MRPL1Q9BYD6 325 aaKnown RBP11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 ACPTQ9BZG2 426 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 C20orf27Q9GZN8 174 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 LANCL2Q9NS86 450 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 ZDHHC2Q9UIJ5 367 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 MKL2Q9ULH7 1088 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 DAPP1Q9UN19 280 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 ACACAQ13085 2346 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 IGF2RP11717 2491 aa11.99□□□□□ -0.49
TSPAN9-207ENST00000539631 PSMD12O00232 456 aaPredicted RBP11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 B4GALT2O60909 372 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 HSPA4LO95757 839 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 IGHEP01854 428 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 GBAP04062 536 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 IL10P22301 178 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 MMP11P24347 488 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 TSFMP43897 325 aaKnown RBP11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 SLC1A6P48664 564 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 PPP2R2AP63151 447 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 RHAGQ02094 409 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 ZNF33BQ06732 778 aa11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 TBL3Q12788 808 aaKnown RBP11.98□□□□□ -0.49
TSPAN9-207ENST00000539631 STX3Q13277 289 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms