RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MMABQ96EY8 250 aaPredicted RBP12.29□□□□□ -0.44
CCDC42-202ENST00000539522 CMTM7Q96FZ5 175 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 C3orf30Q96M34 536 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
CCDC42-202ENST00000539522 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 TXLNGQ9NUQ3 528 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 KCMF1Q9P0J7 381 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 HCN3Q9P1Z3 774 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
CCDC42-202ENST00000539522 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 CLDN16Q9Y5I7 305 aa12.29□□□□□ -0.44
CCDC42-202ENST00000539522 A0A087WV48 116 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TRPC5OSA6NMA1 111 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 H0YIG0 161 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ZNF195O14628 629 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TMPRSS11DO60235 418 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 UROSP10746 265 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TCN2P20062 427 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ATP5A1P25705 553 aaKnown RBP12.28□□□□□ -0.44
CCDC42-202ENST00000539522 SERPINB1P30740 379 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 DLSTP36957 453 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
CCDC42-202ENST00000539522 BTN3A2P78410 334 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TLE3Q04726 772 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 RGS1Q08116 209 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 DNASE1L3Q13609 305 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 IL10RAQ13651 578 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ERV3-1Q14264 604 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 KIAA0040Q15053 153 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 NCF4Q15080 339 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 NKG7Q16617 165 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ZSCAN26Q16670 478 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 PRMT9Q6P2P2 845 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 EPGNQ6UW88 154 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 RNF165Q6ZSG1 346 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 MAVSQ7Z434 540 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TBC1D19Q8N5T2 526 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ENDOVQ8N8Q3 282 aaKnown RBP12.28□□□□□ -0.44
CCDC42-202ENST00000539522 KCNE4Q8WWG9 221 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 SELENOMQ8WWX9 145 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 STON2Q8WXE9 905 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 APIPQ96GX9 242 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 CSF3RQ99062 836 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 TMEM120AQ9BXJ8 343 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ELOVL6Q9H5J4 265 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 BRF2Q9HAW0 419 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 PFDN4Q9NQP4 134 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 LANCL2Q9NS86 450 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 GIMAP2Q9UG22 337 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ADGRE2Q9UHX3 823 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 SNX6Q9UNH7 406 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 PCDHGA6Q9Y5G7 932 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 ACACBO00763 2458 aa12.28□□□□□ -0.44
CCDC42-202ENST00000539522 A0A0A6YYD5 115 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 CCT8L1PA6NM43 557 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 FAM227AF5H4B4 570 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 TGFBR3LH3BV60 316 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 KLK10O43240 276 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 CHST10O43529 356 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ULK1O75385 1050 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 DCTN3O75935 186 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 RECKO95980 971 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 GBAP04062 536 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 TPP2P29144 1249 aaPredicted RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 IDH3AP50213 366 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 STXBP1P61764 594 aaKnown RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 FOXK2Q01167 660 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 IFT88Q13099 833 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 HERC3Q15034 1050 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 TMEM35AQ53FP2 167 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 XKR7Q5GH72 579 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ATP1A1-AS1Q5TC04 95 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 OR4C11Q6IEV9 310 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 MRM1Q6IN84 353 aaKnown RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 SHISA6Q6ZSJ9 500 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 METTL4Q8N3J2 472 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ACOT4Q8N9L9 421 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 OR51Q1Q8NH59 317 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ADAMTS17Q8TE56 1095 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 CHTF18Q8WVB6 975 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 REPS1Q96D71 796 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 RILPQ96NA2 401 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 CCT7Q99832 543 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 DPH2Q9BQC3 489 aaPredicted RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 NLNQ9BYT8 704 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ACTL8Q9H568 366 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 DDX31Q9H8H2 851 aaKnown RBP12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ANKHQ9HCJ1 492 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 HEY2Q9UBP5 337 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 FIS1Q9Y3D6 152 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 BSNQ9UPA5 3926 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms