RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 AGTR2P50052 363 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LIN52Q52LA3 116 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TANGO2Q6ICL3 276 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 UNQ6126/PRO20091Q6UXV3 157 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PSMA8Q8TAA3 256 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 CEP76Q8TAP6 659 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MSANTD3Q96H12 275 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TRIB3Q96RU7 358 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 UBE2ZQ9H832 354 aaPredicted RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SP140LQ9H930 580 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MEAF6Q9HAF1 191 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LRIT1Q9P2V4 623 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 IFT52Q9Y366 437 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PDYNP01213 254 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 IL3P08700 152 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ALDH3A2P51648 485 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TRAP1Q12931 704 aaKnown RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 C5orf22Q49AR2 442 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ZNF101Q8IZC7 436 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MFSD2AQ8NA29 543 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TOR1AIP2Q8NFQ8 470 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 OR5K1Q8NHB7 308 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SHKBP1Q8TBC3 707 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 NAT6Q93015 286 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SLC46A2Q9BY10 475 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ABCB10Q9NRK6 738 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 STARD5Q9NSY2 213 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ACTR10Q9NZ32 417 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PCDHB14Q9Y5E9 798 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PRSS38A1L453 326 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MTRF1O75570 445 aaKnown RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ITGA10O75578 1167 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SLC6A6P31641 620 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ODF4Q2M2E3 257 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GTF2IRD2BQ6EKJ0 949 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SLC2A7Q6PXP3 512 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GTF2IRD2Q86UP8 949 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MFSD6LQ8IWD5 586 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LRTOMTQ8WZ04 291 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GAREM1Q9H706 876 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 FAM120CQ9NX05 1096 aaKnown RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ZIM2Q9NZV7 527 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GNG8Q9UK08 70 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GJD2Q9UKL4 321 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 FADS3Q9Y5Q0 445 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 KDM3BQ7LBC6 1761 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GPR89AB7ZAQ6 455 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MT-ND5P03915 603 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 GPR89BP0CG08 455 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 RAP2AP10114 183 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PORP16435 677 aaPredicted RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 BPIP17213 487 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TTKP33981 857 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 DGKQP52824 942 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 PITX1P78337 314 aaPredicted RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MALLQ13021 153 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 SPIN3Q5JUX0 258 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 DENND5AQ6IQ26 1287 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 HTR3DQ70Z44 454 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LINGO2Q7L985 606 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ARMC10Q8N2F6 343 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 KCNA7Q96RP8 456 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 CD180Q99467 661 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 S100A14Q9HCY8 104 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ENY2Q9NPA8 101 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LAMP5Q9UJQ1 280 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TMPRSS11EQ9UL52 423 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 C5P01031 1676 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 MYH1P12882 1939 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 CACNA1FO60840 1977 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 HTR3EA5X5Y0 456 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ZNF878C9JN71 531 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TLR4O00206 839 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 BCAP31P51572 246 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 OR12D2P58182 307 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 IDNKQ5T6J7 187 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 LPCAT4Q643R3 524 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 NANOS1Q8WY41 292 aaKnown RBP9.11□□□□□ -0.95
PTPRB-204ENST00000538708 ZFYVE21Q9BQ24 234 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 TMEM184CQ9NVA4 438 aa9.11□□□□□ -0.95
PTPRB-204ENST00000538708 CHD4Q14839 1912 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 VSTM2BA6NLU5 285 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 EMC8O43402 210 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 ADAMTS4O75173 837 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 EGFP01133 1207 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 DCNP07585 359 aaKnown RBP9.1□□□□□ -0.95
PTPRB-204ENST00000538708 IFI30P13284 250 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 OR3A3P47888 321 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 OR3A2P47893 321 aa9.1□□□□□ -0.95
PTPRB-204ENST00000538708 UFM1P61960 85 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms