RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ZNHIT3Q15649 155 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 TMEM71Q6P5X7 295 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 SLC23A3Q6PIS1 610 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 TMEM107Q6UX40 140 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 LANCL3Q6ZV70 420 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 TAGAPQ8N103 731 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 RIBC1Q8N443 379 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 ICA1LQ8NDH6 482 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 STT3BQ8TCJ2 826 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 DTX3LQ8TDB6 740 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 SLCO2A1Q92959 643 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 NACC2Q96BF6 587 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 RMND5BQ96G75 393 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 GEMIN8Q9NWZ8 242 aaKnown RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 RAB21Q9UL25 225 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ERVK-19Q9WJR5 959 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 MYO16Q9Y6X6 1858 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SLC5A10A0PJK1 596 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CCDC154A6NI56 674 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 IDSB3KWA1 339 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 NUDT21O43809 227 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 NPPBP16860 134 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 GRK2P25098 689 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CRHR1P34998 444 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 BCL6P41182 706 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TRPC1P48995 793 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 GRB7Q14451 532 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 OR4A15Q8NGL6 344 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 STARD8Q92502 1023 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CRELD1Q96HD1 420 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 LYSMD1Q96S90 227 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 PCBD2Q9H0N5 130 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 C1GALT1Q9NS00 363 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ZNF282Q9UDV7 671 aaPredicted RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 PCOLCE2Q9UKZ9 415 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 IGHV5-10-1A0A0J9YXX1 117 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 HDAC3O15379 428 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 NOBOXO60393 691 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 PROCP04070 461 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 RNH1P13489 461 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 DCDP81605 110 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 SGCBQ16585 318 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SLC9B1Q4ZJI4 515 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 UNC50Q53HI1 259 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TECRLQ5HYJ1 363 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ATAD3BQ5T9A4 648 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 B3GNTL1Q67FW5 361 aaPredicted RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 FAM111BQ6SJ93 734 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TMPRSS9Q7Z410 1059 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ACOT4Q8N9L9 421 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SUMF1Q8NBK3 374 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 OR1L3Q8NH93 324 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TMEM125Q96AQ2 219 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 FAM120BQ96EK7 910 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 QRFPRQ96P65 431 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TEKT2Q9UIF3 430 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 HAO1Q9UJM8 370 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CROTQ9UKG9 612 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TRPC5OSA6NMA1 111 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SLC28A2O43868 658 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 HS6ST1O60243 411 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 PCDHGA12O60330 932 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 EEDO75530 441 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 TIAF1O95411 115 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 H2AFXP16104 143 aaPredicted RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 ZNF28P17035 718 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 LSSP48449 732 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 KIR2DS3Q14952 304 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CCNJQ5T5M9 372 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 NDUFAF5Q5TEU4 345 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 PAPD4Q6PIY7 484 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 SBSNQ6UWP8 590 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 ZYG11AQ6WRX3 759 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 TMEM151BQ8IW70 566 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 GALNT15Q8N3T1 639 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 OR2A1Q8NGT9 310 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CMTM7Q96FZ5 175 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 THOC3Q96J01 351 aaKnown RBP6.88□□□□□ -1.31
MSH6-209ENST00000538136 RANBP9Q96S59 729 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 METTL7AQ9H8H3 244 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 AKTIPQ9H8T0 292 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 ZBTB26Q9HCK0 441 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 OGFRQ9NZT2 677 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 USH1CQ9Y6N9 552 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CACNA1DQ01668 2161 aa6.88□□□□□ -1.31
MSH6-209ENST00000538136 CCDC187A0A096LP49 1063 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 MED19A0JLT2 244 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 E7ESA3 106 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 STMND1H3BQB6 276 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms