RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HAGHLQ6PII5 290 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 BTN2A1Q7KYR7 527 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 CEP97Q8IW35 865 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 FAM86B1Q8N7N1 296 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PPHLN1Q8NEY8 458 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PCYT2Q99447 389 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TCEAL7Q9BRU2 100 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ATXN3LQ9H3M9 355 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 CARS2Q9HA77 564 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 CASS4Q9NQ75 786 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 UFSP2Q9NUQ7 469 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SIRT5Q9NXA8 310 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ZFC3H1O60293 1989 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 SEC14L5O43304 696 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 AP2A2O94973 939 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 PTHP01270 115 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 NMBRP28336 390 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 RPS19P39019 145 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 ALDH9A1P49189 494 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 ENTHD1Q8IYW4 607 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF567Q8N184 647 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 DPP10Q8N608 796 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF565Q8N9K5 539 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 GSN-AS1Q9NRJ2 163 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 BABAM2Q9NXR7 383 aa10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 PURGQ9UJV8 347 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-207ENST00000537408 CHP2O43745 196 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF682O95780 498 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 DAPP51397 102 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 PPP3R1P63098 170 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 PFKFB4Q16877 469 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 KDM4DQ6B0I6 523 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF549Q6P9A3 640 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 FAM198BQ6UWH4 519 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 MACC1Q6ZN28 852 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM86AQ8N2M4 240 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 OR10A6Q8NH74 314 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 UPRTQ96BW1 309 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 L3HYPDHQ96EM0 354 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 PYURFQ96I23 114 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ERVK-6Q9BXR3 956 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF768Q9H5H4 540 aaKnown RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ALG9Q9H6U8 611 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 HEXA-AS1Q9H8Q6 139 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 PPP1R14DQ9NXH3 145 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 NDUFAF4Q9P032 175 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 KLF15Q9UIH9 416 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 NDRG2Q9UN36 371 aaKnown RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 KCNK7Q9Y2U2 307 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 MPTX1A8MV57 137 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 FGF4P08620 206 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 TPH1P17752 444 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 MAGEA2P43356 314 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 CAP1Q01518 475 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 CTBP1Q13363 440 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 AFTPHQ6ULP2 937 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 C11orf96Q7Z7L8 435 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 TMIEQ8NEW7 156 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 ATP6V1C2Q8NEY4 427 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 FAM120BQ96EK7 910 aaKnown RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 MED18Q9BUE0 208 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 CD244Q9BZW8 370 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 CYTH4Q9UIA0 394 aa10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 SAMD4AQ9UPU9 718 aaKnown RBP10.46□□□□□ -0.74
CLSTN3-207ENST00000537408 IGKV6D-21A0A0A0MT36 114 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ARL5CA6NH57 179 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ARHGEF33A8MVX0 844 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 AIPO00170 330 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PPP6CO00743 305 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 BNIP3LO60238 219 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PCDHGA12O60330 932 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 HPGDSO60760 199 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CDRT1O95170 752 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 AKT1P31749 480 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 YBX1P67809 324 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 EEF1A1P68104 462 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 MXD1Q05195 221 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 EEF1A2Q05639 463 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 DPYSL2Q16555 572 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PABPC1L2AQ5JQF8 200 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 EEF1A1P5Q5VTE0 462 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 KIAA0319Q5VV43 1072 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CD276Q5ZPR3 534 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CPZQ66K79 652 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 IL31Q6EBC2 164 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NADSYN1Q6IA69 706 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 GLCCI1Q86VQ1 547 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PIAS4Q8N2W9 510 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PTGR2Q8N8N7 351 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 MYO19Q96H55 970 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms