RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 HSD17B14Q9BPX1 270 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-208ENST00000537047 AGTPBP1Q9UPW5 1226 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 FBXO7Q9Y3I1 522 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 TCP10L2B9ZVM9 353 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 LRRTM2O43300 516 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 PRAF2O60831 178 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 AKR1B1P15121 316 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 ACHEP22303 614 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 GPX3P22352 226 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 HMGCLP35914 325 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 MDH2P40926 338 aaKnown RBP3.26□□□□□ -1.89
CCDC7-208ENST00000537047 CRMP1Q14194 572 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 KRT80Q6KB66 452 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 MACC1Q6ZN28 852 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
CCDC7-208ENST00000537047 SIGLEC12Q96PQ1 595 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 SLF1Q9BQI6 1058 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 SP140LQ9H930 580 aa3.26□□□□□ -1.89
CCDC7-208ENST00000537047 FOXI3A8MTJ6 420 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-208ENST00000537047 HMGB1P1B2RPK0 211 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-208ENST00000537047 E2F3O00716 465 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 TNFSF11O14788 317 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 EEF2P13639 858 aaKnown RBP3.25□□□□□ -1.89
CCDC7-208ENST00000537047 CPT2P23786 658 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 AIMP1Q12904 312 aaKnown RBP3.25□□□□□ -1.89
CCDC7-208ENST00000537047 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 CRY2Q49AN0 593 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 CST9LP1Q5W188 147 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 NEPROQ6NW34 567 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 AMIGO1Q86WK6 493 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 CFAP57Q96MR6 1250 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 ANKRD27Q96NW4 1050 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 PINK1Q9BXM7 581 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 MYOZ2Q9NPC6 264 aa3.25□□□□□ -1.89
CCDC7-208ENST00000537047 DBF4Q9UBU7 674 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-208ENST00000537047 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 SCO2O43819 266 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 DIAPH2O60879 1101 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 GGPS1O95749 300 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF17P17021 662 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 EPORP19235 508 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 SSTR1P30872 391 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 RPL9P32969 192 aaKnown RBP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 BACE1P56817 501 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 SULT2A1Q06520 285 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 PLPPR4Q7Z2D5 763 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 CROCCP3Q8IVE0 287 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 UBQLNLQ8IYU4 475 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 KCTD6Q8NC69 237 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF564Q8TBZ8 553 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 PCNPQ8WW12 178 aaKnown RBP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 LIPHQ8WWY8 451 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF558Q96NG5 402 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ZBP1Q9H171 429 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 FZD8Q9H461 694 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 RAB9BQ9NP90 201 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.24□□□□□ -1.89
CCDC7-208ENST00000537047 MRGBPQ9NV56 204 aa3.24□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF487B1APH4 448 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 PRSS46E5RG02 174 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 SAP18O00422 153 aaKnown RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 FRAT2O75474 233 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 CALCAP01258 141 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 FYNP06241 537 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ODC1P11926 461 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 TCF4P15884 667 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ERCC2P18074 760 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 HSPA4P34932 840 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF133P52736 654 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 RBBP4Q09028 425 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 TAZQ16635 292 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ZCCHC12Q6PEW1 402 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ENPP7Q6UWV6 458 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 CCDC71Q8IV32 467 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 FAM219AQ8IW50 185 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 XXYLT1Q8NBI6 393 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 PGAP3Q96FM1 320 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 GTPBP2Q9BX10 602 aaKnown RBP3.23□□□□□ -1.89
CCDC7-208ENST00000537047 C5orf66Q9H5L9 145 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 UBQLN2Q9UHD9 624 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 MOKQ9UQ07 419 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 NCKAP1Q9Y2A7 1128 aa3.23□□□□□ -1.89
CCDC7-208ENST00000537047 TRAV18A0A075B6X5 111 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 PANO1I0J062 215 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 LUC7L3O95232 432 aaKnown RBP3.22□□□□□ -1.89
CCDC7-208ENST00000537047 LYPD3O95274 346 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 IL11P20809 199 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 GDF1P27539 372 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
CCDC7-208ENST00000537047 BRCC3P46736 316 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 RBPMS2Q6ZRY4 209 aaKnown RBP3.22□□□□□ -1.89
CCDC7-208ENST00000537047 C15orf52Q6ZUT6 534 aaKnown RBP3.22□□□□□ -1.89
CCDC7-208ENST00000537047 PCGF5Q86SE9 256 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
CCDC7-208ENST00000537047 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms