RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SORCS1Q8WY21 1168 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ING5Q8WYH8 240 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ROBO4Q8WZ75 1007 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF583Q96ND8 569 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 DUX3Q96PT4 197 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 RAB6CQ9H0N0 254 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ZWILCHQ9H900 591 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 RBM28Q9NW13 759 aaKnown RBP3.06□□□□□ -1.92
SNHG1-202ENST00000535689 HAO2Q9NYQ3 351 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 CRNNQ9UBG3 495 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ANAPC5Q9UJX4 755 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF711Q9Y462 761 aa3.06□□□□□ -1.92
SNHG1-202ENST00000535689 CACNA1EQ15878 2313 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PTPRDP23468 1912 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 A0A1B0GUV1 79 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SPAARA0A1B0GVQ0 90 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TRABD2BA6NFA1 517 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SMCO2A6NFE2 343 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ANKUB1A6NFN9 424 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PRAC2D3DTV9 90 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 IFNL4K9M1U5 179 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TO15178 435 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 XRCC3O43542 346 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CYTH3O43739 400 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 EXTL3O43909 919 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 DFNA5O60443 496 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RECQL5O94762 991 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 BAG4O95429 457 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 EDN1P05305 212 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RAB40ALP0C0E4 278 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF883P0CG24 379 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RNF224P0DH78 156 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 FDPSP14324 419 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CDC25CP30307 473 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RPL9P32969 192 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 HSD17B3P37058 310 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TUFMP49411 452 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 NAPAP54920 295 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ERVFC1-1P60608 527 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PSMC5P62195 406 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RPL24P83731 157 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SMARCB1Q12824 385 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RALGDSQ12967 914 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ITGB3BPQ13352 177 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 DMC1Q14565 340 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PDGFRLQ15198 375 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PDLIM3Q53GG5 364 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ELFN2Q5R3F8 820 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SFMBT2Q5VUG0 894 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 LYSMD4Q5XG99 296 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 HIST2H2BCQ6DN03 193 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 HIST2H2BDQ6DRA6 164 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SLC8B1Q6J4K2 584 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF449Q6P9G9 518 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 FIGLAQ6QHK4 219 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PRSS55Q6UWB4 352 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 MIER3Q7Z3K6 550 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TRMT11Q7Z4G4 463 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 METTL23Q86XA0 190 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 LINC00346Q8IVM7 164 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 LSMEM2Q8N112 164 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CCAR2Q8N163 923 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CPSF7Q8N684 471 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 NIPA2Q8N8Q9 360 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF441Q8N8Z8 693 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 IQUBQ8NA54 791 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 NEXN-AS1Q8NBZ9 246 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RBM15BQ8NDT2 890 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SPATA22Q8NHS9 363 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 FAM162AQ96A26 154 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 DHX58Q96C10 678 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ST6GAL2Q96JF0 529 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RADILQ96JH8 1075 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CNOT6LQ96LI5 555 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 RMDN2Q96LZ7 410 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 LRRC3BQ96PB8 259 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 ABHD1Q96SE0 405 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 GTPBP2Q9BX10 602 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TEKT3Q9BXF9 490 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 NFKBIZQ9BYH8 718 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PRORYQ9H606 182 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 GKN1Q9NS71 199 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 MARCH5Q9NX47 278 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 NPAP1Q9NZP6 1156 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 MTRRQ9UBK8 725 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 PILRBQ9UKJ0 227 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SNX7Q9UNH6 387 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 FAF1Q9UNN5 650 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TNNQ9UQP3 1299 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 B3GALT5Q9Y2C3 310 aa3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SPIN1Q9Y657 262 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 SMG1Q96Q15 3661 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 TNRC6BQ9UPQ9 1833 aaKnown RBP3.05□□□□□ -1.92
SNHG1-202ENST00000535689 CREBBPQ92793 2442 aa3.04□□□□□ -1.92
SNHG1-202ENST00000535689 AHCTF1Q8WYP5 2266 aa3.04□□□□□ -1.92
SNHG1-202ENST00000535689 CACNA1DQ01668 2161 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms