RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 EXT2Q93063 718 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 LPAR4Q99677 370 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 ZBTB26Q9HCK0 441 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 KCMF1Q9P0J7 381 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 TMEM216Q9P0N5 145 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 PCTPQ9UKL6 214 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 B3GNT3Q9Y2A9 372 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 PCDHGB6Q9Y5F9 930 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 A8MT66 165 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 MASP2O00187 686 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 B3GALT2O43825 422 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 PRMT3O60678 531 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 CTNSO60931 367 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 CDH16O75309 829 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 SEMA3DO95025 777 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 SIX3O95343 332 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 PTX3P26022 381 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 LIM2P55344 173 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 ZNF33BQ06732 778 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 TRAF3Q13114 568 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 MINDY4Q4G0A6 757 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 TEX35Q5T0J7 233 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 ADNP2Q6IQ32 1131 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 PRICKLE2Q7Z3G6 844 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 SLC22A9Q8IVM8 553 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 RIBC1Q8N443 379 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 NFAM1Q8NET5 270 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 HUS1BQ8NHY5 278 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 L3HYPDHQ96EM0 354 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 ZNF717Q9BY31 904 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 EPS8L2Q9H6S3 715 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 ZBTB20Q9HC78 741 aaPredicted RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 DMRT3Q9NQL9 472 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 MS4A12Q9NXJ0 267 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 CPSF2Q9P2I0 782 aaKnown RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 MRPS33Q9Y291 106 aaKnown RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 ANGPTL3Q9Y5C1 460 aa9.24□□□□□ -0.93
NUP98-220ENST00000533346 SPENQ96T58 3664 aaKnown RBP9.24□□□□□ -0.93
NUP98-220ENST00000533346 SERTM1A2A2V5 107 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 CLEC18AA5D8T8 446 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ZNF860A6NHJ4 632 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 H3BQF6 201 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PSMD12O00232 456 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 CLDN4O14493 209 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 GLRA3O75311 464 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 B3GALT4O96024 378 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 TUBBP07437 444 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 TAC1P20366 129 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 IMPDH1P20839 514 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 HIST1H1TP22492 207 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 ATP5F1P24539 256 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 ATP5A1P25705 553 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 EEF1DP29692 281 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 CRHR1P34998 444 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 GPR143P51810 404 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PLA2G16P53816 162 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PRKAA2P54646 552 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 SLC26A5P58743 744 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 HERVK_113P63132 956 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 OLR1P78380 273 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PHEXP78562 749 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 IGLV3-21P80748 117 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 EEF1A2Q05639 463 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 SLC18A2Q05940 514 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ABRAXAS2Q15018 415 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 TLR1Q15399 786 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 INAQ16352 499 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PLEKHN1Q494U1 663 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 SFT2D3Q587I9 215 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ZNF678Q5SXM1 525 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 OR4C11Q6IEV9 310 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 MRM1Q6IN84 353 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 EMBQ6PCB8 327 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PAPD4Q6PIY7 484 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 CLEC18BQ6UXF7 455 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ZNF793Q6ZN11 406 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 LANCL3Q6ZV70 420 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ACOT4Q8N9L9 421 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 CLEC18CQ8NCF0 446 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 BRIX1Q8TDN6 353 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 AENQ8WTP8 325 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 CAVIN3Q969G5 261 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 RGMAQ96B86 450 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 CCDC126Q96EE4 140 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PHF21BQ96EK2 531 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ZNF354BQ96LW1 612 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 PTCHD1Q96NR3 888 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 F2RL3Q96RI0 385 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ERVK-6Q9BXR3 956 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ROPN1BQ9BZX4 212 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 NOL11Q9H8H0 719 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 DDX31Q9H8H2 851 aaKnown RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 TRIM45Q9H8W5 580 aaPredicted RBP9.23□□□□□ -0.93
NUP98-220ENST00000533346 ACTR8Q9H981 624 aa9.23□□□□□ -0.93
NUP98-220ENST00000533346 ROPN1Q9HAT0 212 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms