RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 IDSB3KWA1 339 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 CLEC3AO75596 197 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 HSPA4LO95757 839 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 KRT6AP02538 564 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 KRT6BP04259 564 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 SERPINE1P05121 402 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 ENO1P06733 434 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 SERPINA6P08185 405 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 BGNP21810 368 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 KRT6CP48668 564 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 KCNC4Q03721 635 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 RCN2Q14257 317 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 FRG2Q64ET8 278 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 ADNP2Q6IQ32 1131 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 ABHD13Q7L211 337 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 LAPTM4BQ86VI4 370 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 LAS2Q8IYD9 372 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 AFAP1L2Q8N4X5 818 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 HUS1BQ8NHY5 278 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 METTL6Q8TCB7 284 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 NT5CQ8TCD5 201 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 CREB3L4Q8TEY5 395 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 FAR2Q96K12 515 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 FRG2BQ96QU4 278 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 TRMOQ9BU70 441 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 RHBGQ9H310 441 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 CLK4Q9HAZ1 481 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 ANKHQ9HCJ1 492 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 FBXL4Q9UKA2 621 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 MRPS2Q9Y399 296 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 FIS1Q9Y3D6 152 aa12.23□□□□□ -0.45
TRAPPC4-212ENST00000533058 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 LOC102723996A0A087X1L8 192 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 A0A1B0GTL3 188 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 A6NL46 340 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 H0YIV9 168 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 H3BQF6 201 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 NPHS1O60500 1241 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SORBS2O94875 1100 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 BMP10O95393 424 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 ESRRBO95718 433 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 HPP00738 406 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 TGFB1P01137 390 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 DHRS4L1P0CG22 281 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZNF888P0CJ79 500 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 ACPPP15309 386 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 IL1RNP18510 177 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 IL10P22301 178 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 CD97P48960 835 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 NEK2P51955 445 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 RAP1GDS1P52306 607 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 PLA2G16P53816 162 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SLC18A1P54219 525 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 EMP2P54851 167 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 WDR4P57081 412 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 RAB8AP61006 207 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 PPP2R2AP63151 447 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SKP1P63208 163 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 FOXK1P85037 733 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 TGM3Q08188 693 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 E2F2Q14209 437 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 HERC3Q15034 1050 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 GGTA1PQ4G0N0 100 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 TMEM205Q6UW68 189 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 IGFL2Q6UWQ7 119 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SHISA6Q6ZSJ9 500 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 CHSY3Q70JA7 882 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZC3H7AQ8IWR0 971 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 RNF175Q8N4F7 328 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 OR9A4Q8NGU2 314 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 AGAP11Q8TF27 550 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SELENOMQ8WWX9 145 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 TM9SF4Q92544 642 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 CMTM7Q96FZ5 175 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 SLC29A3Q9BZD2 475 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 REXO4Q9GZR2 422 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
TRAPPC4-212ENST00000533058 CCDC88CQ9P219 2028 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 A0A088AWK7 358 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 A0A0G2JN53 185 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 MANBAO00462 879 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 UBFD1O14562 309 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ERI3O43414 337 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 KLHL18O94889 574 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 CHEK2O96017 543 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 CHRNGP07510 517 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 HEXBP07686 556 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ALOX12P18054 663 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZNF10P21506 573 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 SERPINB5P36952 375 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 RPS13P62277 151 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms