RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 CCDC77Q9BR77 488 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 TBCDQ9BTW9 1192 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 MRPL46Q9H2W6 279 aaKnown RBP21.58■■□□□ 1.05
CAPN1-222ENST00000532285 PRDM7Q9NQW5 492 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 TEKT2Q9UIF3 430 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 VPS4AQ9UN37 437 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 TSC22D4Q9Y3Q8 395 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 MMACHCQ9Y4U1 282 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 PCDHGA11Q9Y5H2 935 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 PCDHGA10Q9Y5H3 936 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 FLNCQ14315 2725 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 IQANK1A0A1B0GTG1 560 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 ZIC2O95409 532 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 TGFB1P01137 390 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 MYBL2P10244 700 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 MAOAP21397 527 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 EEF1DP29692 281 aaKnown RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 PIK3CBP42338 1070 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 ARG2P78540 354 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 RCN2Q14257 317 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 ZNF169Q14929 603 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 TLR1Q15399 786 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 PRR30Q53SZ7 412 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 ABHD17BQ5VST6 288 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 H3F3CQ6NXT2 135 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 CISD2Q8N5K1 135 aaKnown RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 AMER2Q8N7J2 671 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 HAS2Q92819 552 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 REPS1Q96D71 796 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 SNRNP40Q96DI7 357 aaKnown RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 EPB41L4BQ9H329 900 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 MMP25Q9NPA2 562 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 MAP10Q9P2G4 905 aa21.57■■□□□ 1.04
CAPN1-222ENST00000532285 PSMC3IPQ9P2W1 217 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 MRPS33Q9Y291 106 aaKnown RBP21.57■■□□□ 1.04
CAPN1-222ENST00000532285 IGKV3D-11A0A0A0MRZ8 115 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 TCRBV16S1A1N1A0A5B0 115 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 H0YIV9 168 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 CLDN4O14493 209 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 CERS1P27544 350 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 TNFRSF8P28908 595 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 B3GNTL1Q67FW5 361 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-222ENST00000532285 UBE3DQ7Z6J8 389 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 LCA5Q86VQ0 697 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 CYP4X1Q8N118 509 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 L3MBTL4Q8NA19 623 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 HUS1BQ8NHY5 278 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.56■■□□□ 1.04
CAPN1-222ENST00000532285 RNF32Q9H0A6 362 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 KCNK13Q9HB14 408 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 STMN3Q9NZ72 180 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 DAPP1Q9UN19 280 aa21.56■■□□□ 1.04
CAPN1-222ENST00000532285 RP1L1Q8IWN7 2480 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-222ENST00000532285 A8MUI8 341 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 TSFMP43897 325 aaKnown RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 LIM2P55344 173 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 HSD17B7P56937 341 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 SLC26A5P58743 744 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 PHEXP78562 749 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 DDX39BQ13838 428 aaKnown RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 AP5B1Q2VPB7 878 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 DEPDC1Q5TB30 811 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 KHDRBS2Q5VWX1 349 aaKnown RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 ZNF595Q8IYB9 648 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 CATSPER1Q8NEC5 780 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 ATP6V1E2Q96A05 226 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 C19orf60Q96EN9 201 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 ZNF354BQ96LW1 612 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 MAGEB10Q96LZ2 347 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 CENPKQ9BS16 269 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 SLC29A3Q9BZD2 475 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 NOL11Q9H8H0 719 aaKnown RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 LYRM4Q9HD34 91 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 NECTIN3Q9NQS3 549 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 PRTFDC1Q9NRG1 225 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 PLA2G3Q9NZ20 509 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 PCTPQ9UKL6 214 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 COPG1Q9Y678 874 aaKnown RBP21.55■■□□□ 1.04
CAPN1-222ENST00000532285 RELNP78509 3460 aa21.55■■□□□ 1.04
CAPN1-222ENST00000532285 CLDN9O95484 217 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 ATP5A1P25705 553 aaKnown RBP21.54■■□□□ 1.04
CAPN1-222ENST00000532285 CCNG1P51959 295 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 ZNF33BQ06732 778 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 CPSF6Q16630 551 aaKnown RBP eCLIP21.54■■□□□ 1.04
CAPN1-222ENST00000532285 SCUBE1Q8IWY4 988 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 TMEM151AQ8N4L1 468 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 ACOT4Q8N9L9 421 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 ACMSDQ8TDX5 336 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 MTERF1Q99551 399 aaKnown RBP21.54■■□□□ 1.04
CAPN1-222ENST00000532285 OR51B5Q9H339 312 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 DMRT3Q9NQL9 472 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 ASF1BQ9NVP2 202 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 RNF11Q9Y3C5 154 aa21.54■■□□□ 1.04
CAPN1-222ENST00000532285 SAGE2PA6NJ88 616 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 CYR61O00622 381 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 OR7A17O14581 309 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 SH3BGRLO75368 114 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 SCELO95171 688 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 WDPCPO95876 746 aa21.53■■□□□ 1.04
CAPN1-222ENST00000532285 PTX3P26022 381 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms