RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 UBTD2Q8WUN7 234 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 KCTD4Q8WVF5 259 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 ATP6V1E2Q96A05 226 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 NXNL1Q96CM4 212 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 CMTM7Q96FZ5 175 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 ACTR8Q9H981 624 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 PNO1Q9NRX1 252 aaKnown RBP11.8□□□□□ -0.52
C11orf54-210ENST00000531516 NINJ2Q9NZG7 142 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 PCDHGB6Q9Y5F9 930 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
C11orf54-210ENST00000531516 TNRC6AQ8NDV7 1962 aaKnown RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 PCSK5Q92824 1860 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 A0A087WUV0 522 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 A0A0G2JN53 185 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 TCRBV16S1A1N1A0A5B0 115 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 GABRR3A8MPY1 467 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 SMIM24O75264 130 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 B3GALT4O96024 378 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 C1QAP02745 245 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 COX7A2P14406 83 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 MAOAP21397 527 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 CYB561P49447 251 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 BTG2P78543 158 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 HYAL2Q12891 473 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 TUBA3CQ13748 450 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 SERTAD2Q14140 314 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 OR1C1Q15619 314 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 PFKFB4Q16877 469 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 ADPRMQ3LIE5 342 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 FBXO48Q5FWF7 155 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 LIPJQ5W064 366 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 FCRLBQ6BAA4 426 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 ABHD17CQ6PCB6 329 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 TUBA3EQ6PEY2 450 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 GFRALQ6UXV0 394 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 IFT20Q8IY31 132 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 NR4A3Q92570 626 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 DAZLQ92904 295 aaKnown RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 SCYL1Q96KG9 808 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 ATOH8Q96SQ7 321 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 CDCP1Q9H5V8 836 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 LYRM4Q9HD34 91 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 IGSF5Q9NSI5 407 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 MS4A12Q9NXJ0 267 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 CPSF2Q9P2I0 782 aaKnown RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 FBXW2Q9UKT8 454 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 OSGIN2Q9Y236 505 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 CLCA3PQ9Y6N3 262 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 NBASA2RRP1 2371 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 BSNQ9UPA5 3926 aa11.79□□□□□ -0.52
C11orf54-210ENST00000531516 SETXQ7Z333 2677 aaKnown RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 RP1L1Q8IWN7 2480 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-210ENST00000531516 A8MUA0 341 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 FAM227AF5H4B4 570 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 POC1B-GALNT4F8VUJ3 575 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 UGDHO60701 494 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SEMA7AO75326 666 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 MYO1DO94832 1006 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 COL6A2P12110 1019 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 TNNI3P19429 210 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 PPP2R1BP30154 601 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SSR2P43308 183 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SNRPNP63162 240 aaKnown RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 BIKQ13323 160 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SETDB1Q15047 1291 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 C4orf17Q53FE4 359 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 GRHL2Q6ISB3 625 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 LAS2Q8IYD9 372 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 TMEM156Q8N614 296 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 B3GNT7Q8NFL0 401 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SLC44A1Q8WWI5 657 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 F2RL3Q96RI0 385 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SLX1AQ9BQ83 275 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 CDC42EP4Q9H3Q1 356 aaKnown RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 ADAP2Q9NPF8 381 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 LRFN1Q9P244 771 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SUCOQ9UBS9 1254 aaKnown RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 PHF11Q9UIL8 331 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 ZNF490Q9ULM2 529 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 DAPP1Q9UN19 280 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 NTNG1Q9Y2I2 539 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 ANKRD12Q6UB98 2062 aa11.78□□□□□ -0.52
C11orf54-210ENST00000531516 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
C11orf54-210ENST00000531516 HEATR5BQ9P2D3 2071 aa11.77□□□□□ -0.52
C11orf54-210ENST00000531516 IGKV3D-11A0A0A0MRZ8 115 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 TRBV11-1A0A0K0K1C0 115 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 EXOC1LA0A1B0GW35 172 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 CTNSO60931 367 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ZFAND5O76080 213 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 CPN2P22792 545 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 PTX3P26022 381 aaPredicted RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 CERS1P27544 350 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms