RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 BTBD3Q9Y2F9 522 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 GNG14A0A1W2PPG7 69 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 CST1P01037 141 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 TRAPPC2P0DI81 140 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 TRAPPC2BP0DI82 140 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 LAMP1P11279 417 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 POLR2CP19387 275 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 UGT2B10P36537 528 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 P2RY2P41231 377 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 HNF4AP41235 474 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 ISL1P61371 349 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 NCS1P62166 190 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 CSTF3Q12996 717 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 PON2Q15165 354 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 ANKRD34AQ69YU3 496 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 LAIR2Q6ISS4 152 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 GDPD3Q7L5L3 318 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 NLRP8Q86W28 1048 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 SH3KBP1Q96B97 665 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 REXO5Q96IC2 774 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 CCDC115Q96NT0 180 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 ACAT2Q9BWD1 397 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 MKRN2Q9H000 416 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 TRIM39Q9HCM9 518 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 ADPRHL2Q9NX46 363 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 SPEF1Q9Y4P9 236 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 CFAP20Q9Y6A4 193 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 PTGES3LE9PB15 166 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 G3V2T6 193 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 RFXAPO00287 272 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 POLR1CO15160 346 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 MRPS14O60783 128 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 LILRB5O75023 590 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 MTRF1O75570 445 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 ANXA4P09525 319 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 PRPS1L1P21108 318 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 AGXTP21549 392 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 PRPH2P23942 346 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP35-207ENST00000530546 COLEC12Q5KU26 742 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 CCNJQ5T5M9 372 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 IER5LQ5T953 404 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 ATG9BQ674R7 924 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 CAPN13Q6MZZ7 669 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 FAM83HQ6ZRV2 1179 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 ZNF551Q7Z340 670 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 FAM9CQ8IZT9 166 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 SVOPLQ8N434 492 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 TESCQ96BS2 214 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 TMEM245Q9H330 911 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 SMURF2Q9HAU4 748 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 RUVBL1Q9Y265 456 aaKnown RBP11.08□□□□□ -0.64
USP35-207ENST00000530546 DYRK1BQ9Y463 629 aa11.08□□□□□ -0.64
USP35-207ENST00000530546 YY2O15391 372 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 SCELO95171 688 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PCDH8O95206 1070 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ZNF682O95780 498 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ENGP17813 658 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PTPN6P29350 595 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 OPRD1P41143 372 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 DUSP6Q16828 381 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 YIF1BQ5BJH7 314 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 LRIF1Q5T3J3 769 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ZNF691Q5VV52 312 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 VITQ6UXI7 678 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 FAM109AQ8N4B1 249 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 KLK6Q92876 244 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CHFRQ96EP1 664 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 MAGEB10Q96LZ2 347 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 RBM4BQ9BQ04 359 aaKnown RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 KXD1Q9BQD3 176 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 RBM4Q9BWF3 364 aaKnown RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 PLA2G2FQ9BZM2 168 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 AMBRA1Q9C0C7 1298 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PRSS16Q9NQE7 514 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 SPATA6Q9NWH7 488 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 SH3BP4Q9P0V3 963 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ASF1AQ9Y294 204 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 MAN2B2Q9Y2E5 1009 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 U3KQV3 271 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 IGLON5A6NGN9 336 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 METTL15A6NJ78 407 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 H0YIV9 168 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ERVH48-1M5A8F1 160 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CLIC1O00299 241 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 NOBOXO60393 691 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 UGDHO60701 494 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms