RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 UQCRHP07919 91 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 PSMB5P28074 263 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 PRDX3P30048 256 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 HSD17B2P37059 387 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 ACAP2Q15057 778 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 SLC5A12Q1EHB4 618 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 C18orf21Q32NC0 220 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 CDKL4Q5MAI5 379 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 IRGCQ6NXR0 463 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 AGTRAPQ6RW13 159 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 SPESP1Q6UW49 350 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 UNQ6494/PRO21346Q6UXR6 183 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 FAM92BQ6ZTR7 304 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 OVCH1Q7RTY7 1134 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 LCA5Q86VQ0 697 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 PPFIBP2Q8ND30 876 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 OR2A1Q8NGT9 310 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 OR56A3Q8NH54 315 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 SMPDL3AQ92484 453 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 RHBDF1Q96CC6 855 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 AHCYL2Q96HN2 611 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 SLC41A2Q96JW4 573 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 TGM7Q96PF1 710 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 CD180Q99467 661 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 MAP3K3Q99759 626 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 ZNF768Q9H5H4 540 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 ARL15Q9NXU5 204 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 NUDT4Q9NZJ9 180 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 TMEM216Q9P0N5 145 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 XPR1Q9UBH6 696 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 RALYQ9UKM9 306 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 CLCA2Q9UQC9 943 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 SH2B3Q9UQQ2 575 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 KLK4Q9Y5K2 254 aa8.38□□□□□ -1.07
CCDC90B-217ENST00000530253 IGKV1-8A0A0C4DH67 115 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 A0A0J9YY10 115 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GSAPA4D1B5 854 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 UBXN8O00124 270 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 KALRNO60229 2985 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 NRP2O60462 931 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GUCA1CO95843 209 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 MT-ND3P03897 115 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GSTA1P08263 222 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 PVRP15151 417 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ST6GAL1P15907 406 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 CREB1P16220 341 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 OAS2P29728 719 aaKnown RBP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GGT5P36269 586 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GABRA4P48169 554 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 COL10A1Q03692 680 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 PRKAA1Q13131 559 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 TARDBPQ13148 414 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 TRA2AQ13595 282 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ZIC1Q15915 447 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 RABL3Q5HYI8 236 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 CEP85LQ5SZL2 805 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 SUSD1Q6UWL2 747 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 FRA10AC1Q70Z53 315 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 MRGPREQ86SM8 312 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 GPSM1Q86YR5 675 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 SYTL1Q8IYJ3 562 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 C4orf33Q8N1A6 199 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 RAB42Q8N4Z0 105 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 BMPERQ8N8U9 685 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 BANPQ8N9N5 519 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 OR2L3Q8NG85 312 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 STAG3L4Q8TBR4 150 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 UBTD2Q8WUN7 234 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ZBTB9Q96C00 473 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 PGM2Q96G03 612 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ZDHHC12Q96GR4 267 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 TRAPPC9Q96Q05 1148 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 DEPDC7Q96QD5 511 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 OR4K3Q96R72 315 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 TRIM54Q9BYV2 358 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ATG10Q9H0Y0 220 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 MRPL46Q9H2W6 279 aaKnown RBP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 CCDC177Q9NQR7 707 aaPredicted RBP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ARGLU1Q9NWB6 273 aaPredicted RBP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ZNF446Q9NWS9 450 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 LNPEPQ9UIQ6 1025 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 PTBP2Q9UKA9 531 aaKnown RBP8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 BTRCQ9Y297 605 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 ACACAQ13085 2346 aa8.37□□□□□ -1.07
CCDC90B-217ENST00000530253 CFAP46Q8IYW2 2715 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 UBE2QL1A1L167 161 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 NCF1BA6NI72 391 aaPredicted RBP8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 A8MT66 165 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 NCF1CA8MVU1 366 aaPredicted RBP8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 ISM1B1AKI9 464 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 MAP2K7O14733 419 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 HCRTR1O43613 425 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 TYROBPO43914 113 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 PLIN3O60664 434 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 PRAMEF10O60809 474 aa8.36□□□□□ -1.07
CCDC90B-217ENST00000530253 GLRA3O75311 464 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms