RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TSPAN8P19075 237 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ATP5A1P25705 553 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ARL1P40616 181 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 RPS13P62277 151 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PHEXP78562 749 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 EEF1A2Q05639 463 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 RAPSNQ13702 412 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 NSDHLQ15738 373 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 GGTA1PQ4G0N0 100 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 LANCL3Q6ZV70 420 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PTRH1Q86Y79 214 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PARP9Q8IXQ6 854 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 TRPC4APQ8TEL6 797 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PPP4R1Q8TF05 950 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 RGMAQ96B86 450 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 CCDC126Q96EE4 140 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 L3HYPDHQ96EM0 354 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 IMMP1LQ96LU5 166 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 MAGEB10Q96LZ2 347 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 TMEM237Q96Q45 408 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 COPS7BQ9H9Q2 264 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PRM3Q9NNZ6 103 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 RIC8BQ9NVN3 520 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 MKS1Q9NXB0 559 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 KCMF1Q9P0J7 381 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PPT2Q9UMR5 302 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 DAPP1Q9UN19 280 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF451Q9Y4E5 1061 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 DOCK10Q96BY6 2186 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 BSNQ9UPA5 3926 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 SAP18O00422 153 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 RTCAO00442 366 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 PRMT3O60678 531 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 SCELO95171 688 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ITGA3P26006 1051 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 CERS1P27544 350 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 TSFMP43897 325 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 NEK2P51955 445 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ARFIP1P53367 373 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 LIM2P55344 173 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 RAB38P57729 211 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 BTG2P78543 158 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 CUL3Q13618 768 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ABRAXAS2Q15018 415 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 AP5B1Q2VPB7 878 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 C10orf62Q5T681 223 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 VWA5B1Q5TIE3 1220 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 FRG2Q64ET8 278 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 TTC19Q6DKK2 380 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 OR4C11Q6IEV9 310 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 LETMD1Q6P1Q0 360 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF793Q6ZN11 406 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 QSOX2Q6ZRP7 698 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 HPS6Q86YV9 775 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 KBTBD2Q8IY47 623 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 IQCKQ8N0W5 287 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ACOT4Q8N9L9 421 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 BANPQ8N9N5 519 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ADAMTS18Q8TE60 1221 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 TSLPQ969D9 159 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 MTFMTQ96DP5 389 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 THOC3Q96J01 351 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 FRG2BQ96QU4 278 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 CENPKQ9BS16 269 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 TUBB6Q9BUF5 446 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 LHPPQ9H008 270 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 C12orf65Q9H3J6 166 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 LYRM4Q9HD34 91 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 TRPS1Q9UHF7 1281 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF225Q9UK10 706 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 PLLPQ9Y342 182 aa11.92□□□□□ -0.5
CCDC90B-216ENST00000529856 IGKV3D-11A0A0A0MRZ8 115 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 IGHV3-20A0A0C4DH32 117 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 CYR61O00622 381 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 PLPP1O14494 284 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SUV39H1O43463 412 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 OR4F21O95013 312 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 ETHE1O95571 254 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 MLYCDO95822 493 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SERPINA7P05543 415 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 PRR35P0CG20 571 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 ICAM2P13598 275 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 CPA3P15088 417 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 HIST1H1TP22492 207 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 RAP1GDS1P52306 607 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 DNAJB13P59910 316 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 ACTN3Q08043 901 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 KLRB1Q12918 225 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 IFT88Q13099 833 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms