RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RCN2Q14257 317 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 PCBP2Q15366 365 aaKnown RBP eCLIP30.99■■■□□ 2.552e-13■■□□□ 14.2
SSSCA1-205ENST00000527920 PFKFB4Q16877 469 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 TMEM35AQ53FP2 167 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 GRHL2Q6ISB3 625 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 SCUBE1Q8IWY4 988 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 IFT20Q8IY31 132 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 SLC5A8Q8N695 610 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 GRHL3Q8TE85 626 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 FAR1Q8WVX9 515 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 KCNC2Q96PR1 638 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 MS4A8Q9BY19 250 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 VPS11Q9H270 941 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 ADGRE2Q9UHX3 823 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 MRPS33Q9Y291 106 aaKnown RBP30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 TSC22D4Q9Y3Q8 395 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 POLEQ07864 2286 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 A0A0G2JN53 185 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 SAGE2PA6NJ88 616 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 A8MUI8 341 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 HSD17B7P56937 341 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 TAS2R50P59544 299 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 TERF2Q15554 542 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 MEP1AQ16819 746 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 TECRLQ5HYJ1 363 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 TEX9Q8N6V9 391 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 ST6GALNAC3Q8NDV1 305 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 OR7G3Q8NG95 312 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 ELP5Q8TE02 316 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 COPS7BQ9H9Q2 264 aaPredicted RBP30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 ABI3Q9P2A4 366 aa30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 USP9YO00507 2555 aaPredicted RBP30.98■■■□□ 2.55
SSSCA1-205ENST00000527920 ANKUB1A6NFN9 424 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 CLDN4O14493 209 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 UGDHO60701 494 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 COL6A2P12110 1019 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 PIK3CGP48736 1102 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 FAM180AQ6UWF9 173 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 ZNF595Q8IYB9 648 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 DCAKDQ8WVC6 231 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 F2RL3Q96RI0 385 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 TBCDQ9BTW9 1192 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 NECTIN3Q9NQS3 549 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 PRDM7Q9NQW5 492 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 NFU1Q9UMS0 254 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 DAPP1Q9UN19 280 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 ANGPTL3Q9Y5C1 460 aa30.97■■■□□ 2.55
SSSCA1-205ENST00000527920 SCELO95171 688 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 RBP1P09455 135 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 TSNAXIP1Q2TAA8 658 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 LIPJQ5W064 366 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 TRMT10CQ7L0Y3 403 aaKnown RBP30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 BCORP1Q8N888 145 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 SUN3Q8TAQ9 357 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 LYRM4Q9HD34 91 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 TMCO1Q9UM00 188 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 PCDHGB6Q9Y5F9 930 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 HIVEP3Q5T1R4 2406 aa30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 SPTAN1Q13813 2472 aaKnown RBP30.96■■■□□ 2.55
SSSCA1-205ENST00000527920 PRAMEF2O60811 474 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 AGFG2O95081 481 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CERS1P27544 350 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 PIK3CBP42338 1070 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 LIM2P55344 173 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 EIF2S3LQ2VIR3 472 aaKnown RBP30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CHSY3Q70JA7 882 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 UBE3DQ7Z6J8 389 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CRLF3Q8IUI8 442 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CYP4X1Q8N118 509 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 BEST3Q8N1M1 668 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 PLD6Q8N2A8 252 aaKnown RBP30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 NFAM1Q8NET5 270 aaPredicted RBP30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CMTM7Q96FZ5 175 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 MAGEB10Q96LZ2 347 aaPredicted RBP30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 NPAS2Q99743 824 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 SLX1AQ9BQ83 275 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 CLDN16Q9Y5I7 305 aa30.95■■■□□ 2.55
SSSCA1-205ENST00000527920 POC1B-GALNT4F8VUJ3 575 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 CYR61O00622 381 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 E2F3O00716 465 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 EDN3P14138 238 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 ELOAQ14241 798 aaKnown RBP30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 PRTFDC1Q9NRG1 225 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 CPSF2Q9P2I0 782 aaKnown RBP30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 PCDHGA11Q9Y5H2 935 aa30.94■■■□□ 2.54
SSSCA1-205ENST00000527920 PCNAP12004 261 aa30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 ZNF324BQ6AW86 544 aaPredicted RBP30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 FCRLBQ6BAA4 426 aa30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 ARMC10Q8N2F6 343 aa30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 ACTR8Q9H981 624 aa30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 PPIEQ9UNP9 301 aaKnown RBP30.93■■■□□ 2.54
SSSCA1-205ENST00000527920 EXOC1LA0A1B0GW35 172 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 TRIM49D1C9J1S8 452 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 H0YIV9 168 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 F10P00742 488 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 SNRPAP09012 282 aaKnown RBP30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 ATP5A1P25705 553 aaKnown RBP30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 ARFIP1P53367 373 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 GTF2H2Q13888 395 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms