RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PRSS53Q2L4Q9 553 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 RFTN2Q52LD8 501 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 MLIPQ5VWP3 458 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 GALNT18Q6P9A2 607 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ABHD13Q7L211 337 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ZCCHC7Q8N3Z6 543 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ENDOVQ8N8Q3 282 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 GBP7Q8N8V2 638 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 STT3BQ8TCJ2 826 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 TWIST2Q8WVJ9 160 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 KCNE4Q8WWG9 221 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 COL26A1Q96A83 441 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 RGMAQ96B86 450 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 FCRL1Q96LA6 429 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 MAGEB18Q96M61 343 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 SERINC2Q96SA4 455 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CSF3RQ99062 836 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 MAPKAP1Q9BPZ7 522 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ILKAPQ9H0C8 392 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CLK4Q9HAZ1 481 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 EML4Q9HC35 981 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ANKHQ9HCJ1 492 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 HCN3Q9P1Z3 774 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 VPS29Q9UBQ0 182 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 DAPP1Q9UN19 280 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CDC14AQ9UNH5 594 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 SLC12A4Q9UP95 1085 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 EXO1Q9UQ84 846 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 FIS1Q9Y3D6 152 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 NUP210LQ5VU65 1888 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CEP295Q9C0D2 2601 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 URADA6NGE7 173 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 LSM1O15116 133 aaKnown RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 NKX2-8O15522 239 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 KLK1P06870 262 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 ZGLP1P0C6A0 271 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 AGXTP21549 392 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 PTPN4P29074 926 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 TSFMP43897 325 aaKnown RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 AVPR1BP47901 424 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 BTG2P78543 158 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 RHAGQ02094 409 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 GUCY1A3Q02108 690 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 KLC1Q07866 573 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 SLAMF1Q13291 335 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 IL10RAQ13651 578 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 VWA5B1Q5TIE3 1220 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 WDR75Q8IWA0 830 aaKnown RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 MMP21Q8N119 569 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 C1orf52Q8N6N3 182 aaKnown RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 PLPP5Q8NEB5 264 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 FKBP10Q96AY3 582 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 TM4SF18Q96CE8 201 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 PEX11GQ96HA9 241 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 C7orf26Q96N11 449 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 KCNC2Q96PR1 638 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 NPLQ9BXD5 320 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 DPH1Q9BZG8 443 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 SLC7A5P2Q9GIP4 190 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 IFT80Q9P2H3 777 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-205ENST00000527046 TRPC4Q9UBN4 977 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 ADAM29Q9UKF5 820 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 TCFL5Q9UL49 500 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 ATG4BQ9Y4P1 393 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 FREM2Q5SZK8 3169 aa10.16□□□□□ -0.78
NEDD8-205ENST00000527046 ASPMQ8IZT6 3477 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ACACAQ13085 2346 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ATP6AP2A0A1C7CYW4 349 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 C21orf140B9A014 251 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SLC28A1O00337 649 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SDHDO14521 159 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 KLK10O43240 276 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 PROM1O43490 865 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 PRKRAO75569 313 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ATP6AP2O75787 350 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SNUPNO95149 360 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 FBLP22087 321 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 TACR1P25103 407 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SOX18P35713 384 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 XCR1P46094 333 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 HK2P52789 917 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 GYS2P54840 703 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 AP5B1Q2VPB7 878 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 C6orf136Q5SQH8 315 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ARHGAP40Q5TG30 622 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 C18orf63Q68DL7 685 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 CGB2Q6NT52 195 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SHISA6Q6ZSJ9 500 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 COMMD6Q7Z4G1 85 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 CLNKQ7Z7G1 428 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 TRIM42Q8IWZ5 723 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 IL22RA1Q8N6P7 574 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 SRFBP1Q8NEF9 429 aaKnown RBP10.15□□□□□ -0.78
NEDD8-205ENST00000527046 OR2Y1Q8NGV0 311 aa10.15□□□□□ -0.78
NEDD8-205ENST00000527046 PPP1R14CQ8TAE6 165 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms