RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SHCBP1LQ9BZQ2 653 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 ROGDIQ9GZN7 287 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 SOX17Q9H6I2 414 aaPredicted RBP12.22□□□□□ -0.45
SMPD1-202ENST00000526280 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 TNFRSF12AQ9NP84 129 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 C14orf105Q9NVL8 296 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
SMPD1-202ENST00000526280 PRDM4Q9UKN5 801 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 TIMM22Q9Y584 194 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 MGAQ8IWI9 3026 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 ZFYVE26Q68DK2 2539 aa12.22□□□□□ -0.45
SMPD1-202ENST00000526280 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 RTCAO00442 366 aaKnown RBP12.21□□□□□ -0.45
SMPD1-202ENST00000526280 PLPP1O14494 284 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 B3GALT2O43825 422 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 SCELO95171 688 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 CHRNGP07510 517 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 HSD3B1P14060 373 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ATP5A1P25705 553 aaKnown RBP12.21□□□□□ -0.45
SMPD1-202ENST00000526280 HSD3B2P26439 372 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 TSFMP43897 325 aaKnown RBP12.21□□□□□ -0.45
SMPD1-202ENST00000526280 XCR1P46094 333 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 RAP1GDS1P52306 607 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 MTTPP55157 894 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 RUNX2Q13950 521 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 CHI3L2Q15782 390 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 COL28A1Q2UY09 1125 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 AP5B1Q2VPB7 878 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ATP1A1-AS1Q5TC04 95 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 CES4AQ5XG92 561 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ZNF793Q6ZN11 406 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 CUZD1Q86UP6 607 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 PRSS58Q8IYP2 241 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 CA13Q8N1Q1 262 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ARFGAP2Q8N6H7 521 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ACOT4Q8N9L9 421 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 NACC2Q96BF6 587 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 PEX11GQ96HA9 241 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 OR1F2PQ96R84 312 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 ZNF717Q9BY31 904 aaPredicted RBP12.21□□□□□ -0.45
SMPD1-202ENST00000526280 EML4Q9HC35 981 aaKnown RBP12.21□□□□□ -0.45
SMPD1-202ENST00000526280 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 NKIRAS1Q9NYS0 192 aa12.21□□□□□ -0.45
SMPD1-202ENST00000526280 SERTM1A2A2V5 107 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 CDC14CA4D256 554 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 IDSB3KWA1 339 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 JRKO75564 520 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 CRCPO75575 148 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SEMA3DO95025 777 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SERPINE1P05121 402 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 FGF4P08620 206 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 UROSP10746 265 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 RNH1P13489 461 aaKnown RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 HIST1H1TP22492 207 aaPredicted RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 MMP11P24347 488 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 CERS1P27544 350 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 ARRB2P32121 409 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 BSGP35613 385 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SSR2P43308 183 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 HTR6P50406 440 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 ZSCAN26Q16670 478 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 ATG14Q6ZNE5 492 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 MED25Q71SY5 747 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 GPR155Q7Z3F1 870 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 GBP7Q8N8V2 638 aaPredicted RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 PPP1R14CQ8TAE6 165 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 THAP4Q8WY91 577 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 TBC1D20Q96BZ9 403 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 HBEGFQ99075 208 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 PAIP2Q9BPZ3 127 aaKnown RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 CRB3Q9BUF7 120 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SORBS1Q9BX66 1292 aaKnown RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 COPS7BQ9H9Q2 264 aaPredicted RBP12.2□□□□□ -0.46
SMPD1-202ENST00000526280 LANCL2Q9NS86 450 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SEMA3GQ9NS98 782 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 C3orf18Q9UK00 162 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
SMPD1-202ENST00000526280 AZIN1O14977 448 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 IGHEP01854 428 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 FHP07954 510 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 CYC1P08574 325 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 CHN1P15882 459 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 GRK2P25098 689 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 SERPINB3P29508 390 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 OTX2P32243 289 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 EFNA3P52797 238 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 EMP2P54851 167 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 LIM2P55344 173 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 CLEC6AQ6EIG7 209 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 TRIM46Q7Z4K8 759 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 PPP1R32Q7Z5V6 425 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 RAB43Q86YS6 212 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms