RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SAP18O00422 153 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SOCS6O14544 535 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TM9SF1O15321 606 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 CTIFO43310 598 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 DPM1O60762 260 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRAMEF4O60810 478 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRIM13O60858 407 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SH3BGRLO75368 114 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ULK1O75385 1050 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SPAG7O75391 227 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 JRKO75564 520 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 DNAJB5O75953 348 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4F21O95013 312 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZWINTO95229 277 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ESRRBO95718 433 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 B3GALT4O96024 378 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SBK3P0C264 359 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SMIM10L1P0DMW3 83 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 HSD3B1P14060 373 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 COX7A2P14406 83 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TSPAN8P19075 237 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 HIST1H1TP22492 207 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 CPN2P22792 545 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP5A1P25705 553 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 HSD3B2P26439 372 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SERPINB5P36952 375 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 NAGLUP54802 743 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 HSD17B7P56937 341 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 FOXL2P58012 376 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4D2P58180 307 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TAS2R50P59544 299 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF33BQ06732 778 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 C19orf57Q0VDD7 668 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 STX4Q12846 297 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 HYAL2Q12891 473 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 NFATC3Q12968 1075 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 CSTF3Q12996 717 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRAF3Q13114 568 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLAMF1Q13291 335 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 MYBPC3Q14896 1274 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 EXT1Q16394 746 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 BTBD16Q32M84 506 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 LINC00303Q3SY05 128 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 UNC50Q53HI1 259 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 DEPDC1Q5TB30 811 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 C6orf163Q5TEZ5 329 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 AGAP7PQ5VUJ5 663 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRAMEF9Q5VWM5 478 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4C11Q6IEV9 310 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADNP2Q6IQ32 1131 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TCTN3Q6NUS6 607 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 JMJD6Q6NYC1 403 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 LETMD1Q6P1Q0 360 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 KIRREL2Q6UWL6 708 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 QSOX2Q6ZRP7 698 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 RIPOR1Q6ZS17 1223 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 FRMD7Q6ZUT3 714 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ASB18Q6ZVZ8 466 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 VN1R5Q7Z5H4 357 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 CPEB2Q7Z5Q1 589 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ANKRD37Q7Z713 158 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 LAPTM4BQ86VI4 370 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 CA13Q8N1Q1 262 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZCCHC7Q8N3Z6 543 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 GALNT16Q8N428 558 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM151AQ8N4L1 468 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 GBP7Q8N8V2 638 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACOT4Q8N9L9 421 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 BANPQ8N9N5 519 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM47BQ8NA70 645 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TEX19Q8NA77 164 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 TCP10LQ8TDR4 215 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 C8orf44Q96CB5 159 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 MTFMTQ96DP5 389 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PGM2Q96G03 612 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ABHD17AQ96GS6 310 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SMIM10Q96HG1 83 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 THOC3Q96J01 351 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 AGAP4Q96P64 663 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZIM3Q96PE6 472 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 LPAR4Q99677 370 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 LHPPQ9H008 270 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR51B5Q9H339 312 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACBD3Q9H3P7 528 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPS8L2Q9H6S3 715 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 BRF2Q9HAW0 419 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZBTB26Q9HCK0 441 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 SSU72Q9NP77 194 aaKnown RBP5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 MID1IP1Q9NPA3 183 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCNK9Q9NPC2 374 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PFDN4Q9NQP4 134 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRTFDC1Q9NRG1 225 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 OXSMQ9NWU1 459 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 PSD3Q9NYI0 1048 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 NKIRAS1Q9NYS0 192 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ABI3Q9P2A4 366 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADAM29Q9UKF5 820 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 EMCNQ9ULC0 261 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms