RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 IGLV3-25P01717 112 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ZFP36L2P47974 494 aaKnown RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 HSF1Q00613 529 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 PMPCAQ10713 525 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MFSD13AQ14CX5 517 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 CNGA3Q16281 694 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ERCC6LQ2NKX8 1250 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SPOPLQ6IQ16 392 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ZNF627Q7L945 461 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 GALNT13Q8IUC8 556 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 TTC39CQ8N584 583 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SLC2A12Q8TD20 617 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 CLEC4CQ8WTT0 213 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 AKAP1Q92667 903 aaKnown RBP eCLIP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 RAD54LQ92698 747 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 HTRA1Q92743 480 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 FAM149B1Q96BN6 582 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ZBED6CLQ96FA7 236 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 CALML4Q96GE6 196 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 NSMCE3Q96MG7 304 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MACROD1Q9BQ69 325 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 TRIM62Q9BVG3 475 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SLC7A5P2Q9GIP4 190 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SHARPINQ9H0F6 387 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SYTL2Q9HCH5 934 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 TBC1D7Q9P0N9 293 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MPDZO75970 2070 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 SPTBP11277 2137 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 A0A1W2PPR1 153 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 SAC3D1A6NKF1 404 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 C3orf70A6NLC5 250 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 CLIC1O00299 241 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TTI1O43156 1089 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 CTDNEP1O95476 244 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 ZBTB11O95625 1053 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 WDPCPO95876 746 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TRUB2O95900 331 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 HNRNPCP07910 306 aaKnown RBP eCLIP6.48□□□□□ -1.372e-6■□□□□ 8.9
NEDD8-203ENST00000524927 APEHP13798 732 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PAX1P15863 534 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 GM2AP17900 193 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 SRD5A1P18405 259 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 CYP2A7P20853 494 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 CCR1P32246 355 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PTH2RP49190 550 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 AGTR2P50052 363 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 NUP107P57740 925 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 FOXL2P58012 376 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 VAMP2P63027 116 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 RALGDSQ12967 914 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 FHL2Q14192 279 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 GOLGA7BQ2TAP0 167 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 ZNF789Q5FWF6 425 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 ZNF766Q5HY98 468 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 C6orf52Q5T4I8 152 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 ATG16L1Q676U5 607 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 FBXO42Q6P3S6 717 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TMEM65Q6PI78 240 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 BRAT1Q6PJG6 821 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 BBS12Q6ZW61 710 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 MAATS1Q7Z4T9 603 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 BCDIN3DQ7Z5W3 292 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PTGR2Q8N8N7 351 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PPHLN1Q8NEY8 458 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 PSMF1Q92530 271 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 CCL19Q99731 98 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 REG4Q9BYZ8 158 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 GPR63Q9BZJ6 419 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 FOXP1Q9H334 677 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TOR3AQ9H497 397 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 ESRP2Q9H6T0 727 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 MRM3Q9HC36 420 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TAS2R14Q9NYV8 317 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 TSPAN16Q9UKR8 245 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 RCE1Q9Y256 329 aa6.48□□□□□ -1.37
NEDD8-203ENST00000524927 SRPRBQ9Y5M8 271 aaKnown RBP6.48□□□□□ -1.37
NEDD8-203ENST00000524927 RYR1P21817 5038 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 PHF3Q92576 2039 aaKnown RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 CCDC88CQ9P219 2028 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 TUBAL3A6NHL2 446 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 HMGB1P1B2RPK0 211 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 VEGFDO43915 354 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 CNOT3O75175 753 aaKnown RBP6.47□□□□□ -1.37
NEDD8-203ENST00000524927 F10P00742 488 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 STATHP02808 62 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 CHN1P15882 459 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 TNFAIP3P21580 790 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 OR1E1P30953 314 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 KRT9P35527 623 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 VPS41P49754 854 aa6.47□□□□□ -1.37
NEDD8-203ENST00000524927 PPP1CAP62136 330 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms