RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CLTAP09496 248 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CISD3P0C7P0 127 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 GIMD1P0DJR0 217 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 IGHV4-38-2P0DP08 117 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ACADMP11310 421 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ZNF23P17027 643 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CYP11B2P19099 503 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 MSH3P20585 1137 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 GLRA2P23416 452 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CDAP32320 146 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PSMC2P35998 433 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 TSPAN7P41732 249 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 GABRB2P47870 512 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PAPOLAP51003 745 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 PDX1P52945 283 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 NAPAP54920 295 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CDH15P55291 814 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 HNRNPKP61978 463 aaKnown RBP eCLIP1.47□□□□□ -2.17
CD44-212ENST00000524922 COG7P83436 770 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ZFP36L1Q07352 338 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 CCDC173Q0VFZ6 552 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SLC12A1Q13621 1099 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TUBB2AQ13885 445 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ELAVL3Q14576 367 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 TAF12Q16514 161 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SNAI3Q3KNW1 292 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 FUT11Q495W5 492 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TMEM35AQ53FP2 167 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CXorf66Q5JRM2 361 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 SPATA1Q5VX52 437 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 HAUS3Q68CZ6 603 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ZNF776Q68DI1 518 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 ZNF613Q6PF04 617 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PAPD4Q6PIY7 484 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 IGFL3Q6UXB1 125 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 DENND5BQ6ZUT9 1274 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 MIER3Q7Z3K6 550 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CAMKMTQ7Z624 323 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ABI3BPQ7Z7G0 1075 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ZNF589Q86UQ0 364 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 CEP57Q86XR8 500 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 MAP7D3Q8IWC1 876 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CCDC13Q8IYE1 715 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 THEM5Q8N1Q8 247 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SCML4Q8N228 414 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ST6GALNAC3Q8NDV1 305 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 HCAR2Q8TDS4 363 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 FAM222BQ8WU58 562 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SCFD1Q8WVM8 642 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 AZIN2Q96A70 460 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PNPLA2Q96AD5 504 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 STAMBPL1Q96FJ0 436 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PIWIL1Q96J94 861 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 B3GALT6Q96L58 329 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 LURAP1Q96LR2 239 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 LINC00479Q96M42 142 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 KLHL15Q96M94 604 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SECISBP2Q96T21 854 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 VGLL1Q99990 258 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SLX1AQ9BQ83 275 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PYM1Q9BRP8 204 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 LXNQ9BS40 222 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TCHPQ9BT92 498 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 H2AFJQ9BTM1 129 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TUBB2BQ9BVA1 445 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 AGXT2Q9BYV1 514 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 UBXN6Q9BZV1 441 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ELOVL4Q9GZR5 314 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 RSPH9Q9H1X1 276 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 WDR13Q9H1Z4 485 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 LHX5Q9H2C1 402 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 UNC45AQ9H3U1 944 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ST6GALNAC4Q9H4F1 302 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 UPF2Q9HAU5 1272 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 TUFT1Q9NNX1 390 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SIX2Q9NPC8 291 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CCDC177Q9NQR7 707 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 SLC7A10Q9NS82 523 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ZDHHC18Q9NUE0 388 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CLIC5Q9NZA1 410 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 AKAP7Q9P0M2 348 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 PDP2Q9P2J9 529 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 LRWD1Q9UFC0 647 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SUN2Q9UH99 717 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 FBXL2Q9UKC9 423 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CCL26Q9Y258 94 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 KLHL20Q9Y2M5 609 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 STYXL1Q9Y6J8 313 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 U3KQA8 63 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 RYR3Q15413 4870 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PDCD11Q14690 1871 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 MYH6P13533 1939 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 DOCK6Q96HP0 2047 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ARID2Q68CP9 1835 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 A0A0G2JNG1 304 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 A0A0J9YWU9 116 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 A0A1B0GUH1 482 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 MEIOCA2RUB1 952 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 FAM149AA5PLN7 773 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 A6NL46 340 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms