RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TSPAN8P19075 237 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 ATP5A1P25705 553 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 CERS1P27544 350 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 SSR2P43308 183 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 NEK2P51955 445 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 SOX8P57073 446 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 RAB38P57729 211 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 DNAJB13P59910 316 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 RPS13P62277 151 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 RHAGQ02094 409 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 EEF1A2Q05639 463 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 LCP2Q13094 533 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 CUL3Q13618 768 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 RUNX2Q13950 521 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 LACTB2Q53H82 288 aaPredicted RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 LETMD1Q6P1Q0 360 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 NDUFAF7Q7L592 441 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 RNF175Q8N4F7 328 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 CCNYL1Q8N7R7 359 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 SERPINI1Q99574 410 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 C12orf65Q9H3J6 166 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 ELOVL6Q9H5J4 265 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 RIC8BQ9NVN3 520 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 GPR83Q9NYM4 423 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 TRPS1Q9UHF7 1281 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 SNX6Q9UNH7 406 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 MRPS33Q9Y291 106 aaKnown RBP11.8□□□□□ -0.52
CCNC-216ENST00000523961 PCDHGB7Q9Y5F8 929 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 PCSK5Q92824 1860 aa11.8□□□□□ -0.52
CCNC-216ENST00000523961 ATMQ13315 3056 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 IGHV1-45A0A0A0MS14 117 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 A0A1B0GTL3 188 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 OR2W5A6NFC9 320 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 RTCAO00442 366 aaKnown RBP11.79□□□□□ -0.52
CCNC-216ENST00000523961 CLDN4O14493 209 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 PRMT3O60678 531 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 OR4F21O95013 312 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 SCELO95171 688 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 PRB1P04280 392 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 COX6A1P12074 109 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 HIST1H1TP22492 207 aaPredicted RBP11.79□□□□□ -0.52
CCNC-216ENST00000523961 ITGA3P26006 1051 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 PGDP52209 483 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 EFNA3P52797 238 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 NAGLUP54802 743 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 PKNOX1P55347 436 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ASPHQ12797 758 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ABRAXAS2Q15018 415 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 NSDHLQ15738 373 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 IRAK1BP1Q5VVH5 260 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 OR4C11Q6IEV9 310 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF793Q6ZN11 406 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 QSOX2Q6ZRP7 698 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 GPRIN3Q6ZVF9 776 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 CPEB2Q7Z5Q1 589 aaKnown RBP11.79□□□□□ -0.52
CCNC-216ENST00000523961 ANKRD37Q7Z713 158 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ACOT4Q8N9L9 421 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ARMC2Q8NEN0 867 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 MTFMTQ96DP5 389 aaKnown RBP11.79□□□□□ -0.52
CCNC-216ENST00000523961 PTCHD1Q96NR3 888 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZIM3Q96PE6 472 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 MESP1Q9BRJ9 268 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 TUBB6Q9BUF5 446 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 SLC29A3Q9BZD2 475 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF700Q9H0M5 742 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 GSTO2Q9H4Y5 243 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF160Q9HCG1 818 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 LYRM4Q9HD34 91 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 MLXIPLQ9NP71 852 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
CCNC-216ENST00000523961 OXSMQ9NWU1 459 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 DAPP1Q9UN19 280 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 TP53TG5Q9Y2B4 290 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 ZNF451Q9Y4E5 1061 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 MMACHCQ9Y4U1 282 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
CCNC-216ENST00000523961 FAM227AF5H4B4 570 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 H3BQF6 201 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 MASP2O00187 686 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 SAP18O00422 153 aaKnown RBP11.78□□□□□ -0.52
CCNC-216ENST00000523961 PLPP1O14494 284 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 SPAG7O75391 227 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 SEMA3DO95025 777 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 KRT6AP02538 564 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 KRT6BP04259 564 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 ALPPP05187 535 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
CCNC-216ENST00000523961 ICAM2P13598 275 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 KRT6CP48668 564 aa11.78□□□□□ -0.52
CCNC-216ENST00000523961 LIM2P55344 173 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms