RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TMEM216Q9P0N5 145 aa15.4■□□□□ 0.06
PABPC1-221ENST00000522720 TBK1Q9UHD2 729 aa15.4■□□□□ 0.06
PABPC1-221ENST00000522720 PCTPQ9UKL6 214 aa15.4■□□□□ 0.06
PABPC1-221ENST00000522720 IGKV3D-11A0A0A0MRZ8 115 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 GOLGA8RI6L899 631 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 CLDN9O95484 217 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 ITGAMP11215 1152 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 ATP5A1P25705 553 aaKnown RBP15.39■□□□□ 0.05
PABPC1-221ENST00000522720 OR4D2P58180 307 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 IGFBP7Q16270 282 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 EXT1Q16394 746 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 CPSF6Q16630 551 aaKnown RBP eCLIP15.39■□□□□ 0.05
PABPC1-221ENST00000522720 BTBD16Q32M84 506 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 KHDRBS2Q5VWX1 349 aaKnown RBP15.39■□□□□ 0.05
PABPC1-221ENST00000522720 PAPD4Q6PIY7 484 aaKnown RBP15.39■□□□□ 0.05
PABPC1-221ENST00000522720 LINC00696Q6ZRV3 163 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 TDRPQ86YL5 185 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 AMER2Q8N7J2 671 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 ADAMTS18Q8TE60 1221 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 PPP4R1Q8TF05 950 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 LPAR4Q99677 370 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 NTMT1Q9BV86 223 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 C1QTNF3Q9BXJ4 246 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 OR51B5Q9H339 312 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 ZBTB26Q9HCK0 441 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 DMRT3Q9NQL9 472 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 PSD3Q9NYI0 1048 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 LUZP4Q9P127 313 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 PTGFRNQ9P2B2 879 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 DAPP1Q9UN19 280 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 RNF11Q9Y3C5 154 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 MMACHCQ9Y4U1 282 aa15.39■□□□□ 0.05
PABPC1-221ENST00000522720 UBR5O95071 2799 aaPredicted RBP15.39■□□□□ 0.05
PABPC1-221ENST00000522720 SHANK1Q9Y566 2161 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 CPAMD8Q8IZJ3 1885 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 TCRBV16S1A1N1A0A5B0 115 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 A8MT66 165 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 CYR61O00622 381 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 SCELO95171 688 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 GSTA1P08263 222 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 RPS17P08708 135 aaKnown RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 PYGBP11216 843 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 MAOAP21397 527 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 PTX3P26022 381 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 CERS1P27544 350 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 LIM2P55344 173 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 RAB38P57729 211 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 VSNL1P62760 191 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 KCNC4Q03721 635 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 DDX39BQ13838 428 aaKnown RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 RCN2Q14257 317 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 RASA2Q15283 850 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 H3F3CQ6NXT2 135 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 RNF175Q8N4F7 328 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 SIRT6Q8N6T7 355 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 ACOT4Q8N9L9 421 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 ARMC2Q8NEN0 867 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 OR52B6Q8NGF0 335 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 M1APQ8TC57 530 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 CPT1CQ8TCG5 803 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 ATP6V1E2Q96A05 226 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 MIB2Q96AX9 1013 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 NSUN5Q96P11 429 aaKnown RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 MTERF1Q99551 399 aaKnown RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 ILKAPQ9H0C8 392 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 LYRM4Q9HD34 91 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 PRM3Q9NNZ6 103 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 MMP25Q9NPA2 562 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 NECTIN3Q9NQS3 549 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 KCMF1Q9P0J7 381 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 DCDC2Q9UHG0 476 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 PLAAQ9Y263 795 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 MRPS33Q9Y291 106 aaKnown RBP15.38■□□□□ 0.05
PABPC1-221ENST00000522720 CSAG2Q9Y5P2 127 aa15.38■□□□□ 0.05
PABPC1-221ENST00000522720 FLNCQ14315 2725 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 SPENQ96T58 3664 aaKnown RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 A0A1W2PPM1 405 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 FOXE1O00358 373 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 RTCAO00442 366 aaKnown RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 CLDN4O14493 209 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 SH3BGRLO75368 114 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 TAC1P20366 129 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 HIST1H1TP22492 207 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 TSFMP43897 325 aaKnown RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 CCNG1P51959 295 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 HNRNPFP52597 415 aaKnown RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 ARFIP1P53367 373 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 HSD17B7P56937 341 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 HERVK_113P63132 956 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 PHEXP78562 749 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 ZRSR2Q15696 482 aaKnown RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 INPP5JQ15735 1006 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-221ENST00000522720 AP5B1Q2VPB7 878 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 ZNF793Q6ZN11 406 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 SH2D5Q6ZV89 423 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 CUZD1Q86UP6 607 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 SCUBE1Q8IWY4 988 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 ZNF595Q8IYB9 648 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 MYRIPQ8NFW9 859 aa15.37■□□□□ 0.05
PABPC1-221ENST00000522720 DNAJB14Q8TBM8 379 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms