RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 ATP12AP54707 1039 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 VSX2P58304 361 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 ERV3-1Q14264 604 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SLC14A2Q15849 920 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 PFKFB4Q16877 469 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 BICRALQ6AI39 1079 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 HSDL2Q6YN16 418 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 GDPGP1Q6ZNW5 385 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 FAM126BQ8IXS8 530 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 B3GNT7Q8NFL0 401 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 EXT2Q93063 718 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TOX2Q96NM4 488 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 PTDSS2Q9BVG9 487 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 BCO2Q9BYV7 579 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SH3BP4Q9P0V3 963 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 EPHA6Q9UF33 1036 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SLC2A6Q9UGQ3 507 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 GPN3Q9UHW5 284 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SAMHD1Q9Y3Z3 626 aaKnown RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TMEM82A0PJX8 343 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 ARVCFO00192 962 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 RGS11O94810 467 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 WISP3O95389 354 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 NCF1P14598 390 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 OR1G1P47890 313 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SULT1E1P49888 294 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 LGALS3BPQ08380 585 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 CD276Q5ZPR3 534 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 RAB11FIP2Q7L804 512 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 CARFQ8N187 725 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 OR1M1Q8NGA1 313 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SFXN2Q96NB2 322 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC2A13Q96QE2 648 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 DMRTA2Q96SC8 542 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC38A3Q99624 504 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 MED18Q9BUE0 208 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SEMA4CQ9C0C4 833 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 OR51M1Q9H341 326 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 EVA1AQ9H8M9 152 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 DLL4Q9NR61 685 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC22A11Q9NSA0 550 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 ASB4Q9Y574 426 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 HYKKA2RU49 373 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 ERI2A8K979 691 aaKnown RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SGK494L7N484 410 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 POP7O75817 140 aaKnown RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC6A1P30531 599 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 ALDH9A1P49189 494 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 JAG1P78504 1218 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 DSC2Q02487 901 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 OPCMLQ14982 345 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 PPA1Q15181 289 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 DUOXA2Q1HG44 320 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 PRAMEF19Q5SWL8 479 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 PYHIN1Q6K0P9 492 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC25A25Q6KCM7 469 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 C3P1Q6ZMU1 363 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SHFQ7M4L6 423 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 TRMT11Q7Z4G4 463 aaKnown RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 C10orf111Q8N326 155 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 TMEM130Q8N3G9 435 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 EIF4E3Q8N5X7 224 aaKnown RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 WDR20Q8TBZ3 569 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SH3RF2Q8TEC5 729 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SETD7Q8WTS6 366 aaKnown RBP11.57□□□□□ -0.56
SPIDR-217ENST00000522117 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 TMEM176AQ96HP8 235 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 CRISPLD1Q9H336 500 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 TMEM45AQ9NWC5 275 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 SLC25A37Q9NYZ2 338 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 PHF11Q9UIL8 331 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 POMT2Q9UKY4 750 aa11.57□□□□□ -0.56
SPIDR-217ENST00000522117 MIA3Q5JRA6 1907 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 MTMR11A4FU01 709 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 H0YCG3 227 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 ATG12O94817 140 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 NFKB1P19838 968 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 HOXA6P31267 233 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 MATKP42679 507 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 KCNJ3P48549 501 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 SLC6A3Q01959 620 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 SUPT20HL1Q3ZLR7 823 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 PHACTR4Q8IZ21 702 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 CLDN22Q8N7P3 220 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 BMPERQ8N8U9 685 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 GPR150Q8NGU9 434 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 CENPIQ92674 756 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-217ENST00000522117 NIT2Q9NQR4 276 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 SEC14L4Q9UDX3 406 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-217ENST00000522117 STUB1Q9UNE7 303 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 ENTPD4Q9Y227 616 aa11.56□□□□□ -0.56
SPIDR-217ENST00000522117 SLC6A5Q9Y345 797 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms