RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ZIM3Q96PE6 472 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 PELOQ9BRX2 385 aaKnown RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 TRIM55Q9BYV6 548 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ZNF552Q9H707 407 aaPredicted RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 GPR83Q9NYM4 423 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 AHSPQ9NZD4 102 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 CLDN16Q9Y5I7 305 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 SPACA6W5XKT8 324 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ASPMQ8IZT6 3477 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 DMXL2Q8TDJ6 3036 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ERI3O43414 337 aaKnown RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 NPHS1O60500 1241 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ERLIN1O75477 346 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 SIX3O95343 332 aaPredicted RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 ESRRBO95718 433 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 FAM87AP0C7U9 286 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 MYL2P10916 166 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 KRT15P19012 456 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 BSGP35613 385 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 MFAP5Q13361 173 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 SERTAD2Q14140 314 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 FRMD7Q6ZUT3 714 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 METTL4Q8N3J2 472 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ZCCHC10Q8TBK6 192 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 PPP4R1Q8TF05 950 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 TANKQ92844 425 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 EXT2Q93063 718 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ESAMQ96AP7 390 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 CNDP1Q96KN2 507 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 TMEM237Q96Q45 408 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 RNF11Q9Y3C5 154 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 NSG1A0A0A6YYJ2 146 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 CLDN4O14493 209 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 TYROBPO43914 113 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 SORBS2O94875 1100 aaKnown RBP8.9□□□□□ -0.99
CLK4-209ENST00000521621 KRT4P19013 534 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 CASRP41180 1078 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 CD97P48960 835 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 BTN3A2P78410 334 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 ZNF844Q08AG5 666 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 Q0VFX4 171 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 AP5B1Q2VPB7 878 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 LIPMQ5VYY2 423 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 CPZQ66K79 652 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 KIRREL3Q8IZU9 778 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 DTWD1Q8N5C7 304 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 METTL27Q8N6F8 245 aaPredicted RBP8.9□□□□□ -0.99
CLK4-209ENST00000521621 ACOT4Q8N9L9 421 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 NFAM1Q8NET5 270 aaPredicted RBP8.9□□□□□ -0.99
CLK4-209ENST00000521621 OR4F6Q8NGB9 312 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 OR8K3Q8NH51 312 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 ELP5Q8TE02 316 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 AGAP11Q8TF27 550 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 PNPLA2Q96AD5 504 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 C11orf24Q96F05 449 aaPredicted RBP8.9□□□□□ -0.99
CLK4-209ENST00000521621 ZNF225Q9UK10 706 aa8.9□□□□□ -0.99
CLK4-209ENST00000521621 SAGE2PA6NJ88 616 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PLPP1O14494 284 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 KRT6AP02538 564 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 KRT6BP04259 564 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 FGF4P08620 206 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 CPA3P15088 417 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 KRT6CP48668 564 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 MAT1AQ00266 395 aaKnown RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 IFT88Q13099 833 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 SYT16Q17RD7 645 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 GALNT18Q6P9A2 607 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 GPRIN3Q6ZVF9 776 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 ASB18Q6ZVZ8 466 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PAGE2Q7Z2X7 111 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 NUDT13Q86X67 352 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 FDCSPQ8NFU4 85 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 OR52B6Q8NGF0 335 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PSMF1Q92530 271 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PHF21BQ96EK2 531 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 ZNF764Q96H86 408 aaPredicted RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 NUDT9Q9BW91 350 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 SEMA4CQ9C0C4 833 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 COPS7BQ9H9Q2 264 aaPredicted RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 HCN3Q9P1Z3 774 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PLAAQ9Y263 795 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 SPEGQ15772 3267 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 LRRC14BA6NHZ5 514 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 EIF4E1BA6NMX2 242 aaKnown RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 PSMD12O00232 456 aaPredicted RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 BIRC5O15392 142 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 CTIFO43310 598 aaKnown RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 PRMT3O60678 531 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 GUCY1B2O75343 617 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PRR35P0CG20 571 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 IFFO1Q0D2I5 559 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 AGAP7PQ5VUJ5 663 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 ZNF793Q6ZN11 406 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 Q6ZS92 163 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 TRIM46Q7Z4K8 759 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms