RNA–Protein interactions for RNA: ENST00000521046.1

PCMTD1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-205ENST00000521046 HERVK_113P63132 956 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 PHEXP78562 749 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 TRAF3Q13114 568 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 RCN2Q14257 317 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 CPSF6Q16630 551 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 GGTA1PQ4G0N0 100 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 SLC22A9Q8IVM8 553 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 CYP4X1Q8N118 509 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 WDR20Q8TBZ3 569 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 TSLPQ969D9 159 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 NSUN5Q96P11 429 aaKnown RBP16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 ERVK-6Q9BXR3 956 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 EPN3Q9H201 632 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 COPS7BQ9H9Q2 264 aaPredicted RBP16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 LYRM4Q9HD34 91 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 DAPP1Q9UN19 280 aa16.72■□□□□ 0.27
PCMTD1-205ENST00000521046 FAM227AF5H4B4 570 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 DLX3O60479 287 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 GLRA3O75311 464 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 OTCP00480 354 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 KRT15P19012 456 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 IMPDH1P20839 514 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 HIST1H1TP22492 207 aaPredicted RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ATP5A1P25705 553 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CERS1P27544 350 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CRHR1P34998 444 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CCT5P48643 541 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 PRKAA2P54646 552 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 LIM2P55344 173 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 HSD17B7P56937 341 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 BTG2P78543 158 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CUL3Q13618 768 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 EXT1Q16394 746 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ERCC6LQ2NKX8 1250 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 AP5B1Q2VPB7 878 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 NADK2Q4G0N4 442 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 SFT2D3Q587I9 215 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CRB2Q5IJ48 1285 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ISLR2Q6UXK2 745 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ZNF793Q6ZN11 406 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ZNF595Q8IYB9 648 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 RIBC1Q8N443 379 aaPredicted RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ZADH2Q8N4Q0 377 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ACOT4Q8N9L9 421 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ARMC2Q8NEN0 867 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 MYRIPQ8NFW9 859 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 M1APQ8TC57 530 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 EPS8L3Q8TE67 593 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 PNPLA2Q96AD5 504 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 RGMAQ96B86 450 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 MTERF1Q99551 399 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 LPAR4Q99677 370 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 OR51B5Q9H339 312 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 ZBTB20Q9HC78 741 aaPredicted RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 KCMF1Q9P0J7 381 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 CNTRLQ7Z7A1 2325 aa16.71■□□□□ 0.27
PCMTD1-205ENST00000521046 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 TCRBV16S1A1N1A0A5B0 115 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SYNDIG1LA6NDD5 238 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 CYR61O00622 381 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 CLDN4O14493 209 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SEC24DO94855 1032 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SORBS2O94875 1100 aaKnown RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 TUBBP07437 444 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SOX11P35716 441 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 OR4D2P58180 307 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 TLE1Q04724 770 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 MFAP5Q13361 173 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 ZNF678Q5SXM1 525 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 FRG2Q64ET8 278 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SLC6A19Q695T7 634 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 OR4C11Q6IEV9 310 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 PAPD4Q6PIY7 484 aaKnown RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 Q6ZS92 163 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SCUBE1Q8IWY4 988 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 MREGQ8N565 214 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 BRIX1Q8TDN6 353 aaKnown RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 CDK15Q96Q40 435 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 FRG2BQ96QU4 278 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 PARD6BQ9BYG5 372 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 ROPN1BQ9BZX4 212 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 EPS8L2Q9H6S3 715 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 ROPN1Q9HAT0 212 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 SEMA4BQ9NPR2 832 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 RAB21Q9UL25 225 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 EMCNQ9ULC0 261 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 GRID1Q9ULK0 1009 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 B3GNT3Q9Y2A9 372 aa16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 V9GYY5 206 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-205ENST00000521046 BLACEA4D250 179 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms