RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TERF2Q15554 542 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 OR4D1Q15615 310 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 SULT1C3Q6IMI6 304 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 ADNP2Q6IQ32 1131 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 FGD2Q7Z6J4 655 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 GPSM1Q86YR5 675 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 MCEMP1Q8IX19 187 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 KRT78Q8N1N4 520 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 TCAIMQ8N3R3 496 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CPSF7Q8N684 471 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 FAM98AQ8NCA5 519 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 BBOF1Q8ND07 529 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 OR2L5Q8NG80 312 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 WDR34Q96EX3 536 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PDLIM2Q96JY6 352 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 UBXN10Q96LJ8 280 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 GPR22Q99680 433 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 EHD1Q9H4M9 534 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 SAYSD1Q9NPB0 183 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PRTFDC1Q9NRG1 225 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PNO1Q9NRX1 252 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 DNAJC11Q9NVH1 559 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 WHRNQ9P202 907 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PTBP2Q9UKA9 531 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PYCARDQ9ULZ3 195 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 MEMO1Q9Y316 297 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 ASB1Q9Y576 335 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CACNA1CQ13936 2221 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 FBN2P35556 2912 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 TRBV11-1A0A0K0K1C0 115 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 TCRBV9S1A1TA0A576 114 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 ANKDD1BA6NHY2 528 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 TMEM200CA6NKL6 621 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 FAM159BA6NKW6 160 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CLDN4O14493 209 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 EIF3HO15372 352 aaKnown RBP eCLIP11.6□□□□□ -0.55
CSMD1-205ENST00000519623 B3GALT2O43825 422 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 STK16O75716 305 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
CSMD1-205ENST00000519623 EPORP19235 508 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CD22P20273 847 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 HSPA7P48741 367 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 PLA2G16P53816 162 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 SLC12A2P55011 1212 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 RAB38P57729 211 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 GPX6P59796 221 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 HSF1Q00613 529 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 DOC2AQ14183 400 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 ZKSCAN8Q15776 578 aaPredicted RBP11.6□□□□□ -0.55
CSMD1-205ENST00000519623 ABHD17CQ6PCB6 329 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 C3orf62Q6ZUJ4 267 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 DOLPP1Q86YN1 238 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 SULF2Q8IWU5 870 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 GHDCQ8N2G8 530 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CCT6BQ92526 530 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 TSPAN17Q96FV3 270 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 MAGED4Q96JG8 741 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 RBBP8Q99708 897 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CPNE1Q99829 537 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 REXO4Q9GZR2 422 aaKnown RBP11.6□□□□□ -0.55
CSMD1-205ENST00000519623 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 RUBCNLQ9H714 662 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CNOT10Q9H9A5 744 aaKnown RBP11.6□□□□□ -0.55
CSMD1-205ENST00000519623 CHST11Q9NPF2 352 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 PRDM7Q9NQW5 492 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 GRHL1Q9NZI5 618 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 KCMF1Q9P0J7 381 aa11.6□□□□□ -0.55
CSMD1-205ENST00000519623 DCHS2Q6V1P9 2916 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 FCHO1O14526 889 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 ADAM10O14672 748 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 CLGNO14967 610 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 RAD51CO43502 376 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 PRKNO60260 465 aaPredicted RBP11.59□□□□□ -0.55
CSMD1-205ENST00000519623 CTNSO60931 367 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF24P17028 368 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 GMPRP36959 345 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 CASP2P42575 452 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 SMSP52788 366 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 LIM2P55344 173 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 ATP6V0D1P61421 351 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 E2F2Q14209 437 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 NCCRP1Q6ZVX7 275 aaPredicted RBP11.59□□□□□ -0.55
CSMD1-205ENST00000519623 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 UBE3DQ7Z6J8 389 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 PDPRQ8NCN5 879 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 SPATA4Q8NEY3 305 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 CDKL2Q92772 493 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 NCLNQ969V3 563 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 KIAA1191Q96A73 305 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 TMEM125Q96AQ2 219 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 PTCD3Q96EY7 689 aaKnown RBP11.59□□□□□ -0.55
CSMD1-205ENST00000519623 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 F2RL3Q96RI0 385 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms