RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 PMS2P1A4D2B8 440 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 GOLGA8OA6NCC3 632 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 C4orf51C9J302 202 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 C9J4A7 227 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 GOLGA8NF8WBI6 632 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 I3L1I5 382 aaPredicted RBP13.4□□□□□ -0.26
SDC2-203ENST00000519587 RTCAO00442 366 aaKnown RBP13.4□□□□□ -0.26
SDC2-203ENST00000519587 RDH16O75452 317 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 TIAF1O95411 115 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 PRR35P0CG20 571 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 DRD4P21917 467 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 CERS1P27544 350 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 BSGP35613 385 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 IDH3AP50213 366 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 ARFIP2P53365 341 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 MAPK12P53778 367 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 IRX1P78414 480 aaPredicted RBP13.4□□□□□ -0.26
SDC2-203ENST00000519587 DCDP81605 110 aaKnown RBP13.4□□□□□ -0.26
SDC2-203ENST00000519587 EMX2Q04743 252 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 ZNF763Q0D2J5 394 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 SLC9A5Q14940 896 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 CCNYL2Q5T2Q4 361 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 VWA5B1Q5TIE3 1220 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 NOXRED1Q6NXP6 359 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 GALNT18Q6P9A2 607 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 SPATA19Q7Z5L4 167 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 ACOT4Q8N9L9 421 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 RILPQ96NA2 401 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 WDR55Q9H6Y2 383 aaPredicted RBP13.4□□□□□ -0.26
SDC2-203ENST00000519587 ZNF304Q9HCX3 659 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 PRDM7Q9NQW5 492 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 MS4A12Q9NXJ0 267 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 ASIC5Q9NY37 505 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 NBEAQ8NFP9 2946 aa13.4□□□□□ -0.26
SDC2-203ENST00000519587 SEC16AO15027 2179 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 A0A0A6YYD5 115 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ZNF860A6NHJ4 632 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 C9orf172C9J069 976 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 SGK494L7N484 410 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 PSMD12O00232 456 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 FOXS1O43638 330 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 DXOO77932 396 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 FAM107AO95990 144 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 NTRK1P04629 796 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 KLK1P06870 262 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ANXA4P09525 319 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 PRPS2P11908 318 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 RNH1P13489 461 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 RORAP35398 523 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ASMTP46597 345 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 MAP7Q14244 749 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 RTP5Q14D33 572 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 NKAIN1Q4KMZ8 207 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 PRAMEF17Q5VTA0 474 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 C1orf189Q5VU69 101 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 C6orf15Q6UXA7 325 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 IKBIPQ70UQ0 350 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.27
SDC2-203ENST00000519587 PRSS41Q7RTY9 318 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 METTL27Q8N6F8 245 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 EFCAB3Q8N7B9 438 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 PMEPA1Q969W9 287 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 FKBP10Q96AY3 582 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 SLC46A1Q96NT5 459 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 GBP5Q96PP8 586 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ELAC2Q9BQ52 826 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 FAIM2Q9BWQ8 316 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 SORBS1Q9BX66 1292 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 EBPLQ9BY08 206 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ZNF717Q9BY31 904 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 WDR41Q9HAD4 459 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 LHX9Q9NQ69 397 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 GPN3Q9UHW5 284 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 MAPRE3Q9UPY8 281 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 MRPS33Q9Y291 106 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 MAP4K5Q9Y4K4 846 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 POLR3HQ9Y535 204 aaPredicted RBP13.39□□□□□ -0.27
SDC2-203ENST00000519587 AK5Q9Y6K8 562 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 FER1L5A0AVI2 2057 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 ITPR1Q14643 2758 aa13.39□□□□□ -0.27
SDC2-203ENST00000519587 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
SDC2-203ENST00000519587 BLACEA4D250 179 aa13.38□□□□□ -0.27
SDC2-203ENST00000519587 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
SDC2-203ENST00000519587 MEN1O00255 615 aa13.38□□□□□ -0.27
SDC2-203ENST00000519587 EEDO75530 441 aaKnown RBP13.38□□□□□ -0.27
SDC2-203ENST00000519587 MED26O95402 600 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms