RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 WASHC1A8K0Z3 465 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 FAM227AF5H4B4 570 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 CYR61O00622 381 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ABCB7O75027 752 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 PEX11AO75192 247 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 JRKO75564 520 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 KLK1P06870 262 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 HBQ1P09105 142 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ALDOCP09972 364 aaKnown RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 DRD4P21917 467 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TACR1P25103 407 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 EPHA3P29320 983 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 STAT5AP42229 794 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 SSR2P43308 183 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 IDH3AP50213 366 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 MTTPP55157 894 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LIM2P55344 173 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 PHEXP78562 749 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 ABHD18Q0P651 414 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 DSG2Q14126 1118 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 PRSS53Q2L4Q9 553 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 AP5B1Q2VPB7 878 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TMEM164Q5U3C3 297 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 PRMT9Q6P2P2 845 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TRIM40Q6P9F5 258 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 OVCH1Q7RTY7 1134 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ZC3H7AQ8IWR0 971 aaKnown RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 MMP21Q8N119 569 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 CT55Q8WUE5 264 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TM4SF18Q96CE8 201 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ZNF578Q96N58 590 aaPredicted RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 CSF3RQ99062 836 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 MESP1Q9BRJ9 268 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ANKHQ9HCJ1 492 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LANCL2Q9NS86 450 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 C1orf109Q9NX04 203 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 TEX10Q9NXF1 929 aaPredicted RBP9.34□□□□□ -0.91
CLN8-202ENST00000517514 DKK4Q9UBT3 224 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 VTI1BQ9UEU0 232 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 DAPP1Q9UN19 280 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 ATG4BQ9Y4P1 393 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LAMA5O15230 3695 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 CROCCQ5TZA2 2017 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LOC400499M0QZD8 3231 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 GOLGA8QA0A0J9YX86 632 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 A0A1W2PR48 441 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 GOLGA8OA6NCC3 632 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 GOLGA8NF8WBI6 632 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SLCO1B7G3V0H7 640 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 STMND1H3BQB6 276 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 TGFBR3LH3BV60 316 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 PROM1O43490 865 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 RGS14O43566 566 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SEC22BO75396 215 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 PRKRAO75569 313 aaKnown RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 KLF7O75840 302 aaPredicted RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 BMP10O95393 424 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 TGDSO95455 350 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 RECKO95980 971 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 CHEK2O96017 543 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 FAM58BPP0C7Q3 252 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SDC1P18827 310 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 FBLP22087 321 aaKnown RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 TIA1P31483 386 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLN8-202ENST00000517514 TSFMP43897 325 aaKnown RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 AVPR1BP47901 424 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 RAP1GDS1P52306 607 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 RPL38P63173 70 aaKnown RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 GNGT1P63211 74 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SF3A3Q12874 501 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLN8-202ENST00000517514 CLN3Q13286 438 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SLAMF1Q13291 335 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 ERV3-1Q14264 604 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 NR6A1Q15406 480 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 NKG7Q16617 165 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 VWA2Q5GFL6 755 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SPDYAQ5MJ70 313 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 C18orf63Q68DL7 685 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 NOXRED1Q6NXP6 359 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 MED25Q71SY5 747 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 ERMP1Q7Z2K6 904 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 CLNKQ7Z7G1 428 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 NLGN4XQ8N0W4 816 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 AMER2Q8N7J2 671 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SRFBP1Q8NEF9 429 aaKnown RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 NLGN4YQ8NFZ3 816 aaPredicted RBP9.33□□□□□ -0.92
CLN8-202ENST00000517514 OR51Q1Q8NH59 317 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 MR1Q95460 341 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 TUBGCP3Q96CW5 907 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 EGLN2Q96KS0 407 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 SPSB2Q99619 263 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 CCT7Q99832 543 aa9.33□□□□□ -0.92
CLN8-202ENST00000517514 NPLQ9BXD5 320 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms