RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 COG4Q9H9E3 785 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 VPS37BQ9H9H4 285 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 AMBNQ9NP70 447 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 GJD2Q9UKL4 321 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ELF5Q9UKW6 265 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZHX1Q9UKY1 873 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 A4GNTQ9UNA3 340 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 NIP7Q9Y221 180 aaKnown RBP eCLIP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 HERC2O95714 4834 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 PCDH11YQ9BZA8 1340 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 A0A1W2PPM1 405 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 MAP2K7O14733 419 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 MAGEB2O15479 319 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 B4GALT5O43286 388 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZBED1O96006 694 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 HOXB5P09067 269 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 IL7RP16871 459 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 HTR1EP28566 365 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 CDAP32320 146 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 GNAQP50148 359 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC26A2P50443 739 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR1D5P58170 312 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 EFNB1P98172 346 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 MGAT3Q09327 533 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 DOC2AQ14183 400 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM106AQ4KMX7 169 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 CXorf66Q5JRM2 361 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 N4BP2L1Q5TBK1 243 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 ATP1A1-AS1Q5TC04 95 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SHEQ5VZ18 495 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 LIPJQ5W064 366 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 TATDN1Q6P1N9 297 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 ALPK2Q86TB3 2170 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 AACSQ86V21 672 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 CFAP206Q8IYR0 622 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 NME8Q8N427 588 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 PPFIBP2Q8ND30 876 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR10H4Q8NGA5 316 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 RUFY2Q8WXA3 655 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 ALKBH3Q96Q83 286 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 LBHD1Q9BQE6 289 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 PELOQ9BRX2 385 aaKnown RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 CAPS2Q9BXY5 557 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SP140LQ9H930 580 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 EPB41L5Q9HCM4 733 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 HHATLQ9HCP6 504 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 OSER1Q9NX31 292 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 IMPAD1Q9NX62 359 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SPHK1Q9NYA1 384 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SPG21Q9NZD8 308 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 SENP1Q9P0U3 644 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 RHCGQ9UBD6 479 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 FZR1Q9UM11 496 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 AAR2Q9Y312 384 aaKnown RBP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 NEBP20929 6669 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 LAMA4Q16363 1823 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 HSPG2P98160 4391 aa-1.36□□□□□ -2.63
RNU6-542P-201ENST00000516405 KIAA2026Q5HYC2 2103 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 THADAQ6YHU6 1953 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 UNC79Q9P2D8 2635 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 hCG_38984A0A1B0GV85 526 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 SDHAF1A6NFY7 115 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC15A5A6NIM6 579 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 H0Y3Z8 333 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 SNAP23O00161 211 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FBP2O00757 339 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 MCF2LO15068 1137 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ERAL1O75616 437 aaKnown RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FGF18O76093 207 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 CT47B1P0C2W7 299 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF688P0C7X2 276 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF182P17025 639 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRCPP42785 496 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 GABRB2P47870 512 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 CSNK1DP48730 415 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FLI1Q01543 452 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 MAP2K1Q02750 393 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 EFR3AQ14156 821 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF235Q14590 738 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 DUSP5Q16690 384 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM69AQ5T7M9 428 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 SUSD4Q5VX71 490 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 NANOGP8Q6NSW7 305 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRSS41Q7RTY9 318 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 NUDT13Q86X67 352 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 COMMD2Q86X83 199 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 C12orf56Q8IXR9 622 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 TCEANCQ8N8B7 351 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 TMEM158Q8WZ71 300 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM149B1Q96BN6 582 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 MTERF3Q96E29 417 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 HOOK2Q96ED9 719 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRAM1Q96QH2 718 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 BTBD10Q9BSF8 475 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FEM1AQ9BSK4 669 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM167BQ9BTA0 163 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZHX3Q9H4I2 956 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 TRPV4Q9HBA0 871 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 ESM1Q9NQ30 184 aa-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms