RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 OR5T3Q8NGG3 340 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 METTL21AQ8WXB1 218 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 TLCD1Q96CP7 247 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
NUP54-216ENST00000514901 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 EML4Q9HC35 981 aaKnown RBP13.47□□□□□ -0.25
NUP54-216ENST00000514901 LYRM4Q9HD34 91 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 MKL2Q9ULH7 1088 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 KCNMB2Q9Y691 235 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 SPACA6W5XKT8 324 aa13.47□□□□□ -0.25
NUP54-216ENST00000514901 ZFYVE26Q68DK2 2539 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 NBEAQ8NFP9 2946 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 A0A0G2JN53 185 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 SERTM1A2A2V5 107 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 C4orf51C9J302 202 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 AGPSO00116 658 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MANBAO00462 879 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 ALOX12BO75342 701 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 CRCPO75575 148 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 SSR2P43308 183 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 SERPINB4P48594 390 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 RAB38P57729 211 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MAGOHP61326 146 aaKnown RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 RUNX2Q13950 521 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MINDY4Q4G0A6 757 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 SGO1Q5FBB7 561 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MFSD4BQ5TF39 518 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 ACOT4Q8N9L9 421 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 LSM14AQ8ND56 463 aaKnown RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 PLPP5Q8NEB5 264 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 TTC9Q92623 222 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 ARHGAP9Q9BRR9 750 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 VN1R1Q9GZP7 353 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 P4HTMQ9NXG6 502 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MS4A12Q9NXJ0 267 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 C19orf25Q9UFG5 118 aaPredicted RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
NUP54-216ENST00000514901 HS3ST3B1Q9Y662 390 aa13.46□□□□□ -0.25
NUP54-216ENST00000514901 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 BLACEA4D250 179 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 SYNDIG1LA6NDD5 238 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
NUP54-216ENST00000514901 CLDN4O14493 209 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 PLPP1O14494 284 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 SOCS6O14544 535 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 UBFD1O14562 309 aaKnown RBP13.45□□□□□ -0.26
NUP54-216ENST00000514901 DNAJB6O75190 326 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 SH3BGRLO75368 114 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 PDYNP01213 254 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 DHRS4L1P0CG22 281 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 C8orf89P0DMQ9 161 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 UROSP10746 265 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 SFTPCP11686 197 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 ACPPP15309 386 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 FOXL2P58012 376 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 OLR1P78380 273 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 CSTF3Q12996 717 aaKnown RBP13.45□□□□□ -0.26
NUP54-216ENST00000514901 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 TMEM205Q6UW68 189 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 KIRREL2Q6UWL6 708 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 QSOX2Q6ZRP7 698 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 PAGE2Q7Z2X7 111 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 RNF175Q8N4F7 328 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 PPP1R14CQ8TAE6 165 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 EXTL1Q92935 676 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 MECRQ9BV79 373 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 ING2Q9H160 280 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 ADNPQ9H2P0 1102 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 DDX31Q9H8H2 851 aaKnown RBP13.45□□□□□ -0.26
NUP54-216ENST00000514901 LANCL2Q9NS86 450 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 DAPP1Q9UN19 280 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 MMACHCQ9Y4U1 282 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 PIEZO2Q9H5I5 2752 aa13.45□□□□□ -0.26
NUP54-216ENST00000514901 CHD6Q8TD26 2715 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 LOC102723996A0A087X1L8 192 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 A0A1W2PQ72 361 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 RTCAO00442 366 aaKnown RBP13.44□□□□□ -0.26
NUP54-216ENST00000514901 KLHL41O60662 606 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 PRMT3O60678 531 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 B4GALT2O60909 372 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 JRKO75564 520 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 SNUPNO95149 360 aaKnown RBP13.44□□□□□ -0.26
NUP54-216ENST00000514901 ETHE1O95571 254 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 FGF4P08620 206 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 CERS1P27544 350 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 BSGP35613 385 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 LIM2P55344 173 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 SLAMF1Q13291 335 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 DCAF10Q5QP82 559 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
NUP54-216ENST00000514901 ZNF793Q6ZN11 406 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms