RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PIP5K1AQ99755 562 aa10.35□□□□□ -0.75
RNF4-218ENST00000513284 IL1RL2Q9HB29 575 aa10.35□□□□□ -0.75
RNF4-218ENST00000513284 FAM114A2Q9NRY5 505 aa10.35□□□□□ -0.75
RNF4-218ENST00000513284 TUBA8Q9NY65 449 aaPredicted RBP10.35□□□□□ -0.75
RNF4-218ENST00000513284 ERVK-11Q9UQG0 969 aa10.35□□□□□ -0.75
RNF4-218ENST00000513284 NCKAP5O14513 1909 aa10.35□□□□□ -0.75
RNF4-218ENST00000513284 TCRBV7S2A1N4TA0A589 114 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 CTAGE15A4D2H0 777 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 E5RI56 91 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 GFYI3L273 518 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 ACOT7O00154 380 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 MYO1DO94832 1006 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 RFPL3SP0C7P2 107 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 GABRA1P14867 456 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 ARNTP27540 789 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 SOX3P41225 446 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 SKIV2L2P42285 1042 aaKnown RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 DNASE1L1P49184 302 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 CDK16Q00536 496 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 MEF2AQ02078 507 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 SNX1Q13596 522 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 CCNG2Q16589 344 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 TTLL9Q3SXZ7 439 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 DEFB134Q4QY38 66 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 ARMC3Q5W041 872 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 YTHDF3Q7Z739 585 aaKnown RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 MFSD9Q8NBP5 474 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 FBXO15Q8NCQ5 510 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 PPP1R14CQ8TAE6 165 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 C1orf54Q8WWF1 131 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 ASB11Q8WXH4 323 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 LPGAT1Q92604 370 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 SARAFQ96BY9 339 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 SCYL1Q96KG9 808 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 RASL10BQ96S79 203 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 TCF12Q99081 682 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 TREX1Q9NSU2 369 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 ZNF629Q9UEG4 869 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 FOXD3Q9UJU5 478 aaPredicted RBP10.34□□□□□ -0.75
RNF4-218ENST00000513284 ZKSCAN5Q9Y2L8 839 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 CAPN6Q9Y6Q1 641 aa10.34□□□□□ -0.75
RNF4-218ENST00000513284 TRGV5A0A0B4J1U4 118 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 A8MVJ9 347 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 FAM47E-STBD1D6RA91 191 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 CLDN4O14493 209 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 DVL2O14641 736 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 HCN1O60741 890 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 SMPD2O60906 423 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 ZFAND5O76080 213 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 EPPINO95925 133 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 ESR1P03372 595 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 CATP04040 527 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 ALOX12P18054 663 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 CHRM3P20309 590 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 OGNP20774 298 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 JAK1P23458 1154 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 HRH2P25021 359 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 NMBRP28336 390 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 CDC25BP30305 580 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 AGFG1P52594 562 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 ADARP55265 1226 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 HERC3Q15034 1050 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 THEMIS2Q5TEJ8 643 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 HMBOX1Q6NT76 420 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 DRICH1Q6PGQ1 229 aaPredicted RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 ADGRD1Q6QNK2 874 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 GPALPP1Q8IXQ4 340 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 SREK1Q8WXA9 508 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 NCLNQ969V3 563 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 FAM173AQ9BQD7 235 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 DESI2Q9BSY9 194 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 AARSD1Q9BTE6 412 aaKnown RBP10.33□□□□□ -0.76
RNF4-218ENST00000513284 CCDC68Q9H2F9 335 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 LDAHQ9H6V9 325 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 HOMER3Q9NSC5 361 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 HPF1Q9NWY4 346 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 MYOTQ9UBF9 498 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 MED16Q9Y2X0 877 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 NPFFR2Q9Y5X5 522 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 ANK2Q01484 3957 aa10.33□□□□□ -0.76
RNF4-218ENST00000513284 WWP2O00308 870 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 SIAH2O43255 324 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 SYF2O95926 243 aaKnown RBP10.32□□□□□ -0.76
RNF4-218ENST00000513284 ZNF888P0CJ79 500 aaPredicted RBP10.32□□□□□ -0.76
RNF4-218ENST00000513284 SMIM10L1P0DMW3 83 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 CCL3P10147 92 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 RPL22P35268 128 aaKnown RBP10.32□□□□□ -0.76
RNF4-218ENST00000513284 TIMP3P35625 211 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 CLCN7P51798 805 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 CRADDP78560 199 aa10.32□□□□□ -0.76
RNF4-218ENST00000513284 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms