RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TCRBV7S3A2A0A539 114 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 CTAGE15A4D2H0 777 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 ZNF860A6NHJ4 632 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 SAGE2PA6NJ88 616 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 A8MUA0 341 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 EEF1E1-BLOC1S5C9J1V9 151 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 EEF1E1O43324 174 aaKnown RBP8.43□□□□□ -1.06
NUP54-211ENST00000512151 CD5LO43866 347 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 OR6B1O95007 311 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 OR56A5P0C7T3 313 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 CTAGE8P0CG41 777 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 GABRA1P14867 456 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 AOAHP28039 575 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 VPS41P49754 854 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 DR1Q01658 176 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 TRADDQ15628 312 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 PARP6Q2NL67 630 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 ACSF3Q4G176 576 aaPredicted RBP8.43□□□□□ -1.06
NUP54-211ENST00000512151 XKR6Q5GH73 641 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 KCTD11Q693B1 232 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 KIAA0408Q6ZU52 694 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 ABHD13Q7L211 337 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 MAATS1Q7Z4T9 603 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 CTAGE6Q86UF2 777 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 CTAGE4Q8IX94 777 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 KRT222Q8N1A0 295 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 APCDD1LQ8NCL9 501 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 GRK7Q8WTQ7 553 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 RAD51AP1Q96B01 352 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 PAK5Q9P286 719 aa8.43□□□□□ -1.06
NUP54-211ENST00000512151 ZNF629Q9UEG4 869 aaPredicted RBP8.43□□□□□ -1.06
NUP54-211ENST00000512151 DOCK7Q96N67 2140 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 TRGV5A0A0B4J1U4 118 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 TXNDC9O14530 226 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 TP73O15350 636 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 TLX2O43763 284 aaPredicted RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 EPPINO95925 133 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ERGP11308 486 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 TPH1P17752 444 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 SSR4P51571 173 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 BTG2P78543 158 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 SLC7A5Q01650 507 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 HYAL2Q12891 473 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 GPS1Q13098 491 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 DHX34Q14147 1143 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 SLC10A1Q14973 349 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ZNF750Q32MQ0 723 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 NDUFAF5Q5TEU4 345 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ANKRD22Q5VYY1 191 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 CCDC89Q8N998 374 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ZCCHC10Q8TBK6 192 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 SREK1Q8WXA9 508 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 LDAHQ9H6V9 325 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 IL1RL2Q9HB29 575 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ARGLU1Q9NWB6 273 aaPredicted RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 TUBA8Q9NY65 449 aaPredicted RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 TAC3Q9UHF0 121 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 DMGDHQ9UI17 866 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 FBXW2Q9UKT8 454 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 ERVK-11Q9UQG0 969 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 EIF3LQ9Y262 564 aaKnown RBP8.42□□□□□ -1.06
NUP54-211ENST00000512151 FREM3P0C091 2139 aa8.42□□□□□ -1.06
NUP54-211ENST00000512151 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 CCDC162PA2VCL2 907 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FAM187AA6NFU0 413 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 DNALI1O14645 258 aaPredicted RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 HCN1O60741 890 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 B4GALT2O60909 372 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ANXA9O76027 345 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 STK10O94804 968 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 B3GALT4O96024 378 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 NUDT7P0C024 238 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 RFPL3SP0C7P2 107 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 PAX1P15863 534 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 MAOAP21397 527 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FPR1P21462 350 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 PSMA3P25788 255 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 LOXP28300 417 aaPredicted RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 TIMP3P35625 211 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 GRIA1P42261 906 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 PRDX1Q06830 199 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 TSTA3Q13630 321 aaPredicted RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 SEMA3AQ14563 771 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 KCNJ11Q14654 390 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 NAA25Q14CX7 972 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 HYAL4Q2M3T9 481 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 ICE2Q659A1 982 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ITPRIPL1Q6GPH6 555 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 IL20RBQ6UXL0 311 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 SYDE1Q6ZW31 735 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms